RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TSPAN11A1L157 253 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 WNT9AO14904 365 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 VILLO15195 856 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 ATG13O75143 517 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 AP2A2O94973 939 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC16A8O95907 504 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 GSTM1P09488 218 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 AMD1P17707 334 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 GSTM4Q03013 218 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 DOC2AQ14183 400 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 GGTA1PQ4G0N0 100 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 FAM98BQ52LJ0 330 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 FNDC3BQ53EP0 1204 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 ANKRD26P1Q6NSI1 321 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 NOXRED1Q6NXP6 359 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 CELF5Q8N6W0 485 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 OR7A2PQ8NGA2 310 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 ZFP28Q8NHY6 868 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 TMIGD2Q96BF3 282 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 OTUB2Q96DC9 234 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 CMTM7Q96FZ5 175 aa18.68■□□□□ 0.58
PCDHA4-201ENST00000378125 ELOVL7A1L3X0 281 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 CXCR6O00574 342 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC9A3R1O14745 358 aaPredicted RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 JUPP14923 745 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 RPS9P46781 194 aaKnown RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 CHRNB3Q05901 458 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 PLCL1Q15111 1095 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 OSCP1Q8WVF1 389 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 TMBIM1Q969X1 311 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 FBXL8Q96CD0 374 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 OR4K3Q96R72 315 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 PKP4Q99569 1192 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 BDH2Q9BUT1 245 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 STOX2Q9P2F5 926 aaPredicted RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 FBXO10Q9UK96 956 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 PSIP1O75475 530 aaKnown RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 TCF3P15923 654 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 MTHFRP42898 656 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC14A1Q13336 389 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC36A3Q495N2 470 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 LDLRAP1Q5SW96 308 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 TTC33Q6PID6 262 aaPredicted RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 GALNT15Q8N3T1 639 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 TIFAQ96CG3 184 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 CCM2Q9BSQ5 444 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 OR2AG1Q9H205 316 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 SMPD3Q9NY59 655 aaPredicted RBP18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 FADS3Q9Y5Q0 445 aa18.67■□□□□ 0.58
PCDHA4-201ENST00000378125 H3BSA7 217 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 ZNF197O14709 1029 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 SPINT1O43278 529 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 PRKD3O94806 890 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 RAP2AP10114 183 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 HOXA9P31269 272 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 CACUL1Q86Y37 369 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 SYT12Q8IV01 421 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 CFAP206Q8IYR0 622 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 HS3ST5Q8IZT8 346 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 LEMD2Q8NC56 503 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 ARRDC3Q96B67 414 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 DGCR14Q96DF8 476 aaKnown RBP18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 FAM120BQ96EK7 910 aaKnown RBP18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 KAT8Q9H7Z6 458 aaKnown RBP18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 NUP214P35658 2090 aaPredicted RBP18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 MMP20O60882 483 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 SRPRAP08240 638 aaKnown RBP18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 PRPS2P11908 318 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 GPR180Q86V85 440 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 TRAPPC5Q8IUR0 188 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 NETO1Q8TDF5 533 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 TMEM106CQ9BVX2 250 aa18.66■□□□□ 0.58
PCDHA4-201ENST00000378125 TRBV5-3A0A0A0MS03 114 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 UPK1AO00322 258 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 ETHE1O95571 254 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 ADH1CP00326 375 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 IMPA1P29218 277 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 PRLHRP49683 370 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 NR1H2P55055 460 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 ANKRD34AQ69YU3 496 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 FAM109BQ6ICB4 259 aaPredicted RBP18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 TTC23LQ6PF05 361 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 NEK10Q6ZWH5 1172 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 STK32CQ86UX6 486 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 DHRSXQ8N5I4 330 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC47A1Q96FL8 570 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 ITCHQ96J02 903 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 KCNH6Q9H252 994 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 CLK4Q9HAZ1 481 aaKnown RBP18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 SGK2Q9HBY8 427 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 DKK3Q9UBP4 350 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 GULP1Q9UBP9 304 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 SLC5A10A0PJK1 596 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 RFXANKO14593 260 aa18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 RECQL5O94762 991 aaPredicted RBP18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 CATP04040 527 aaKnown RBP18.65■□□□□ 0.58
PCDHA4-201ENST00000378125 MYF6P23409 242 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms