RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 OSBPL2Q9H1P3 480 aa18.58■□□□□ 0.56
TBC1D4-201ENST00000377625 PIGVQ9NUD9 493 aa18.58■□□□□ 0.56
TBC1D4-201ENST00000377625 OXSMQ9NWU1 459 aa18.58■□□□□ 0.56
TBC1D4-201ENST00000377625 RIMKLBQ9ULI2 386 aa18.58■□□□□ 0.56
TBC1D4-201ENST00000377625 FZD4Q9ULV1 537 aa18.58■□□□□ 0.56
TBC1D4-201ENST00000377625 IGKV6D-41A0A0C4DH26 115 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 XKP51811 444 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CHRNA6Q15825 494 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 ZNF358Q9NW07 568 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 P2RX2Q9UBL9 471 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 A0A0J9YVX5 310 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 OR14I1A6ND48 311 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 MID1O15344 667 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 FMO3P31513 532 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CLEC12AQ5QGZ9 265 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 SYVN1Q86TM6 617 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 SIPA1Q96FS4 1042 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 SUSD3Q96L08 255 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 COMMD3Q9UBI1 195 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 TPD52L2O43399 206 aaKnown RBP18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CREB1P16220 341 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CASRP41180 1078 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 USP43Q70EL4 1123 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 LRRTM4Q86VH4 590 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 LNX2Q8N448 690 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 OR5AK3PQ8NH89 298 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CCDC115Q96NT0 180 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 PPLO60437 1756 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CLDN25C9JDP6 229 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 SIX3O95343 332 aaPredicted RBP18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 APOC1P02654 83 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 GBX2P52951 348 aaPredicted RBP18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 ZNF516Q92618 1163 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 PCDHAC1Q9H158 963 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 SLC32A1Q9H598 525 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 ANKRA2Q9H9E1 313 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CLCNKAP51800 687 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 BRAT1Q6PJG6 821 aa18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 CNDP2Q96KP4 475 aaKnown RBP18.57■□□□□ 0.56
TBC1D4-201ENST00000377625 TNFP01375 233 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 RB1P06400 928 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 OR3A3P47888 321 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 OR3A2P47893 321 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 DHPSP49366 369 aaPredicted RBP18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CRHR2Q13324 411 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 SPIN4Q56A73 249 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 LRRC70Q7Z2Q7 622 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ZNF615Q8N8J6 731 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 OR8H1Q8NGG4 311 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 USP29Q9HBJ7 922 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 GDAP2Q9NXN4 497 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CLDND1Q9NY35 253 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 PCDHGB5Q9Y5G0 923 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 WASF2Q9Y6W5 498 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CDC7O00311 574 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ORC5O43913 435 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 AGXTP21549 392 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 KLHL36Q8N4N3 616 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ZNF676Q8N7Q3 588 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 EBF3Q9H4W6 596 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 PAK6Q9NQU5 681 aaPredicted RBP18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 C9J4A7 227 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 KLK1P06870 262 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 GJA1P17302 382 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 GHRHRQ02643 423 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 TXNDC8Q6A555 127 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 FRMD7Q6ZUT3 714 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 RASGRP3Q8IV61 690 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 NAT8LQ8N9F0 302 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CMTM7Q96FZ5 175 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 C12orf42Q96LP6 360 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 PPM1HQ9ULR3 514 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ARVCFO00192 962 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CDH1P12830 882 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ENGP17813 658 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 IL1R2P27930 398 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 MAP3K8P41279 467 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 GDI2P50395 445 aaKnown RBP18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 TLE2Q04725 743 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 SLC39A3Q9BRY0 314 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 SPIN1Q9Y657 262 aaPredicted RBP18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CLIC1O00299 241 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 HMGN1P05114 100 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ATP1B2P14415 290 aaPredicted RBP18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ZNF3P17036 446 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 RORCP51449 518 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ENPP2Q13822 863 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 TMEM198Q66K66 360 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 CAMKVQ8NCB2 501 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 OR2AP1Q8NGE2 309 aa18.56■□□□□ 0.56
TBC1D4-201ENST00000377625 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
TBC1D4-201ENST00000377625 VIPR1P32241 457 aa18.55■□□□□ 0.56
TBC1D4-201ENST00000377625 GRIA1P42261 906 aa18.55■□□□□ 0.56
TBC1D4-201ENST00000377625 BTN3A2P78410 334 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms