RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 RENBPP51606 427 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 PSMA6P60900 246 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 ACSM2AQ08AH3 577 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 USP39Q53GS9 565 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 CELF3Q5SZQ8 465 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 ACSM2BQ68CK6 577 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SSX9Q7RTT3 188 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 RFT1Q96AA3 541 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 GPR63Q9BZJ6 419 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ST6GALNAC4Q9H4F1 302 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 INTS7Q9NVH2 962 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 PRMT3O60678 531 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 WDPCPO95876 746 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 C1QBP02746 253 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SSTR4P31391 388 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 SLAMF1Q13291 335 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 ELP2Q6IA86 826 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 C3P1Q6ZMU1 363 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ADAMTSL2Q86TH1 951 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 MARCH9Q86YJ5 346 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 FAM217AQ8IXS0 508 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TMEM151AQ8N4L1 468 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ELMOD3Q96FG2 381 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 KCNN2Q9H2S1 579 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SLAMF7Q9NQ25 335 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 PCDHB14Q9Y5E9 798 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 WTIPA6NIX2 430 aaPredicted RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 FABP7O15540 132 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 VIPP01282 170 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 STAG3L1P0CL83 205 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SRCP12931 536 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 FGL1Q08830 312 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TUBB3Q13509 450 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ZNF234Q14588 700 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 Q3C1V9 767 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 CES5AQ6NT32 575 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 BRAT1Q6PJG6 821 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 LDB1Q86U70 411 aaPredicted RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 RETREG3Q86VR2 466 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 WDSUB1Q8N9V3 476 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 C7orf57Q8NEG2 295 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 OR6F1Q8NGZ6 308 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 RPLP0P6Q8NHW5 317 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 GAL3ST3Q96A11 431 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 LURAP1Q96LR2 239 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TLR8Q9NR97 1041 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 MS4A12Q9NXJ0 267 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 EXTL2Q9UBQ6 330 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 PTPRJQ12913 1337 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 A0A1B0GVI7 797 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 OR2AT4A6NND4 320 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ITGB6P18564 788 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 PTX3P26022 381 aaPredicted RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 CHRNA5P30532 468 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 DCTP40126 519 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SLC1A2P43004 574 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 KIR3DL1P43629 444 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 GZMKP49863 264 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 CAPZA1P52907 286 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TGFB2P61812 414 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 S100A12P80511 92 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ARF5P84085 180 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 SLC10A2Q12908 348 aaPredicted RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 PLD1Q13393 1074 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 NTRK2Q16620 822 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 RC3H1Q5TC82 1133 aaKnown RBP10.01□□□□□ -0.81
CD28-202ENST00000374481 MACC1Q6ZN28 852 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TSPAN33Q86UF1 283 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 OR4A15Q8NGL6 344 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 DPF3Q92784 378 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 DOK1Q99704 481 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 OR5F1O95221 314 aa10□□□□□ -0.81
CD28-202ENST00000374481 ALPLP05186 524 aa10□□□□□ -0.81
CD28-202ENST00000374481 CAPN3P20807 821 aa10□□□□□ -0.81
CD28-202ENST00000374481 CPN2P22792 545 aa10□□□□□ -0.81
CD28-202ENST00000374481 APLP1P51693 650 aa10□□□□□ -0.81
CD28-202ENST00000374481 FCGRTP55899 365 aa10□□□□□ -0.81
CD28-202ENST00000374481 DNAJB13P59910 316 aa10□□□□□ -0.81
CD28-202ENST00000374481 NPRL3Q12980 569 aa10□□□□□ -0.81
CD28-202ENST00000374481 CPSF6Q16630 551 aaKnown RBP eCLIP10□□□□□ -0.81
CD28-202ENST00000374481 PTPRNQ16849 979 aa10□□□□□ -0.81
CD28-202ENST00000374481 CATSPEREQ5SY80 951 aa10□□□□□ -0.81
CD28-202ENST00000374481 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
CD28-202ENST00000374481 DOK6Q6PKX4 331 aa10□□□□□ -0.81
CD28-202ENST00000374481 MAMDC4Q6UXC1 1216 aa10□□□□□ -0.81
CD28-202ENST00000374481 LGI4Q8N135 537 aa10□□□□□ -0.81
CD28-202ENST00000374481 WNT8BQ93098 351 aa10□□□□□ -0.81
CD28-202ENST00000374481 COQ8BQ96D53 544 aa10□□□□□ -0.81
CD28-202ENST00000374481 PIWIL1Q96J94 861 aaKnown RBP10□□□□□ -0.81
CD28-202ENST00000374481 QRFPRQ96P65 431 aa10□□□□□ -0.81
CD28-202ENST00000374481 IFT27Q9BW83 186 aa10□□□□□ -0.81
CD28-202ENST00000374481 LRTM1Q9HBL6 345 aa10□□□□□ -0.81
CD28-202ENST00000374481 NANSQ9NR45 359 aa10□□□□□ -0.81
CD28-202ENST00000374481 TJP2Q9UDY2 1190 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms