RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TRPC4APQ8TEL6 797 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF483Q8TF39 744 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 KCNE4Q8WWG9 221 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 GFM2Q969S9 779 aaKnown RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 TMEM159Q96B96 161 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PRR11Q96HE9 360 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 SMIM14Q96QK8 99 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 DPYSL5Q9BPU6 564 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 SPATA16Q9BXB7 569 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 FSD1LQ9BXM9 530 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 ZNHIT2Q9UHR6 403 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 SLC39A10Q9ULF5 831 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 SATB2Q9UPW6 733 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 DTNAQ9Y4J8 743 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 A0A0U1RQS6 177 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 LOC100653049A0A140TA62 436 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ARHGAP10A1A4S6 786 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 VPS4BO75351 444 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 KRT34O76011 436 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 SLC4A1P02730 911 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 FGF1P05230 155 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 PABPC4LP0CB38 370 aaKnown RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 AK4P27144 223 aaPredicted RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 GPR3P46089 330 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 CHN2P52757 468 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 WNT3AP56704 352 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 CCL7P80098 99 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ACAP2Q15057 778 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 LIN52Q52LA3 116 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 BROXQ5VW32 411 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 AP1ARQ63HQ0 302 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 LRRC8EQ6NSJ5 796 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 PRMT9Q6P2P2 845 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 HACD2Q6Y1H2 254 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 KDELC2Q7Z4H8 507 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 SPRED1Q7Z699 444 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 C17orf82Q86X59 251 aaPredicted RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 NRROSQ86YC3 692 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF843Q8N446 348 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF781Q8N8C0 355 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 SPATA22Q8NHS9 363 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 DGCR14Q96DF8 476 aaKnown RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 DUS3LQ96G46 650 aaKnown RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ATXN7L3BQ96GX2 97 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF778Q96MU6 729 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 PLEKHG4BQ96PX9 1271 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 AGAP2Q99490 1192 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF395Q9H8N7 513 aaPredicted RBP10.12□□□□□ -0.79
COL5A1-202ENST00000371820 CPNE5Q9HCH3 593 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ZBTB26Q9HCK0 441 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 CHRAC1Q9NRG0 131 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TMEM45AQ9NWC5 275 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 RIMKLBQ9ULI2 386 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TMCO1Q9UM00 188 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TMEM98Q9Y2Y6 226 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 TCAF1Q9Y4C2 921 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 PSAT1Q9Y617 370 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 RNF215Q9Y6U7 377 aa10.12□□□□□ -0.79
COL5A1-202ENST00000371820 ATMQ13315 3056 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 RP1P56715 2156 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 LOC285095A0A1B0GVY8 99 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 OR5K4A6NMS3 321 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 BBIP1A8MTZ0 92 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FADS2P1A8MWK0 482 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 PFDN6O15212 129 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 KLK10O43240 276 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 VEGFDO43915 354 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 BCAS2O75934 225 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 SLC25A14O95258 325 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 TNFAIP8O95379 198 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CPNE6O95741 557 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 AHSGP02765 367 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FUCA1P04066 466 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 JMJD7P0C870 316 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 PLA2G2AP14555 144 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CD68P34810 354 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 HMGCLP35914 325 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 RPL5P46777 297 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FASLGP48023 281 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 PDX1P52945 283 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 MAZP56270 477 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CRADDP78560 199 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 RHDQ02161 417 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 GTF2H3Q13889 308 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CCNIQ14094 377 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FLOT2Q14254 428 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 SQLEQ14534 574 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 NR1D2Q14995 579 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 TRIP10Q15642 601 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 LSM12Q3MHD2 195 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 ARL13AQ5H913 290 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CES4AQ5XG92 561 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 KDELC1Q6UW63 502 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FRMD7Q6ZUT3 714 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 RAB11FIP2Q7L804 512 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF438Q7Z4V0 828 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms