RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 H0Y858 1186 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 ASLP04424 464 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 GSTM1P09488 218 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 ACPPP15309 386 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 WEE1P30291 646 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 GSTM4Q03013 218 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 ZNF284Q2VY69 593 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 SYTL3Q4VX76 610 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 RASGRP3Q8IV61 690 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 RAVER1Q8IY67 606 aaKnown RBP28.11■■■□□ 2.09
SSBP3-204ENST00000371320 SLC22A15Q8IZD6 547 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 CSGALNACT1Q8TDX6 532 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 GFM2Q969S9 779 aaKnown RBP28.11■■■□□ 2.09
SSBP3-204ENST00000371320 MTG2Q9H4K7 406 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 TMEM202A6NGA9 273 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 GNGT2O14610 69 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 HPRP00739 348 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 CTSLP07711 333 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 GZMMP51124 257 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 LIPJQ5W064 366 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 FKBP9P1Q75LS8 142 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 RNF175Q8N4F7 328 aa28.11■■■□□ 2.09
SSBP3-204ENST00000371320 ARHGEF33A8MVX0 844 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 QSOX1O00391 747 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 B3GALT4O96024 378 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 PTPN6P29350 595 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 CDKN2CP42773 168 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 POM121L1PQ3SYA9 428 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 ZBED5Q49AG3 693 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 CCNYL2Q5T2Q4 361 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 CROCCQ5TZA2 2017 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 C10orf111Q8N326 155 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 BTN2A2Q8WVV5 523 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 MUS81Q96NY9 551 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 GPRC5BQ9NZH0 403 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 NFKBIL1Q9UBC1 381 aaPredicted RBP28.1■■■□□ 2.09
SSBP3-204ENST00000371320 UTS2RQ9UKP6 389 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 INSL6Q9Y581 213 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 HCFC2Q9Y5Z7 792 aa28.1■■■□□ 2.09
SSBP3-204ENST00000371320 RFXANKO14593 260 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 PER2O15055 1255 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 UGDHO60701 494 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 HOXB9P17482 250 aaPredicted RBP28.09■■■□□ 2.09
SSBP3-204ENST00000371320 IST1P53990 364 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 NTHL1P78549 312 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 ZNF805Q5CZA5 627 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 XKR6Q5GH73 641 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 THOC6Q86W42 341 aaKnown RBP28.09■■■□□ 2.09
SSBP3-204ENST00000371320 NETO1Q8TDF5 533 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 EBPLQ9BY08 206 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 PTPRSQ13332 1948 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 PDE4DIPQ5VU43 2346 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 WNT9AO14904 365 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 TSPAN6O43657 245 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 PSIP1O75475 530 aaKnown RBP28.09■■■□□ 2.09
SSBP3-204ENST00000371320 SERPINA1P01009 418 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 SYN1P17600 705 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.09■■■□□ 2.09
SSBP3-204ENST00000371320 LDLRAP1Q5SW96 308 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 OR4F3Q6IEY1 312 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 MSANTD1Q6ZTZ1 278 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 DPPA4Q7L190 304 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 TMEM159Q96B96 161 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 ZSWIM3Q96MP5 696 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 NPLQ9BXD5 320 aaPredicted RBP28.09■■■□□ 2.09
SSBP3-204ENST00000371320 IL23AQ9NPF7 189 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 MARK1Q9P0L2 795 aa28.09■■■□□ 2.09
SSBP3-204ENST00000371320 MYCLP1P12525 358 aaPredicted RBP28.08■■■□□ 2.09
SSBP3-204ENST00000371320 PRPS1L1P21108 318 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 KIR3DL1P43629 444 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 ABHD18Q0P651 414 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 CSTF3Q12996 717 aaKnown RBP28.08■■■□□ 2.09
SSBP3-204ENST00000371320 LAPTM5Q13571 262 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 SYT12Q8IV01 421 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 ERI1Q8IV48 349 aaKnown RBP28.08■■■□□ 2.09
SSBP3-204ENST00000371320 SVOPLQ8N434 492 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 RASGEF1AQ8N9B8 481 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 REXO5Q96IC2 774 aaKnown RBP28.08■■■□□ 2.09
SSBP3-204ENST00000371320 HHIPQ96QV1 700 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 MAGIXQ9H6Y5 334 aa28.08■■■□□ 2.09
SSBP3-204ENST00000371320 CD22P20273 847 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 TECPR1Q7Z6L1 1165 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 ATL1Q8WXF7 558 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 OTUB2Q96DC9 234 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 PRRC2BQ5JSZ5 2229 aaKnown RBP28.07■■■□□ 2.08
SSBP3-204ENST00000371320 PREPP48147 710 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 CTSCP53634 463 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 ZNF33BQ06732 778 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 DOK6Q6PKX4 331 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 CLVS1Q8IUQ0 354 aaPredicted RBP28.07■■■□□ 2.08
SSBP3-204ENST00000371320 ADHFE1Q8IWW8 467 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 NELL1Q92832 810 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 POP5Q969H6 163 aaKnown RBP28.07■■■□□ 2.08
SSBP3-204ENST00000371320 GLYATL1Q969I3 302 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 FCRL1Q96LA6 429 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 RDH12Q96NR8 316 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 SMURF2Q9HAU4 748 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 DKK3Q9UBP4 350 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 VPS29Q9UBQ0 182 aa28.07■■■□□ 2.08
SSBP3-204ENST00000371320 ATG13O75143 517 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms