RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TBL3Q12788 808 aaKnown RBP6.84□□□□□ -1.31
USP1-202ENST00000371146 TRAP1Q12931 704 aaKnown RBP6.84□□□□□ -1.31
USP1-202ENST00000371146 CEP78Q5JTW2 689 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 ARMC4Q5T2S8 1044 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 KIAA1614Q5VZ46 1190 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 DPPA4Q7L190 304 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 RAB44Q7Z6P3 723 aaPredicted RBP6.84□□□□□ -1.31
USP1-202ENST00000371146 SLC25A45Q8N413 288 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 GPR150Q8NGU9 434 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 OLIG1Q8TAK6 271 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 NELL1Q92832 810 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 EID2BQ96D98 161 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 ZNF71Q9NQZ8 489 aaPredicted RBP6.84□□□□□ -1.31
USP1-202ENST00000371146 BAIAP2L1Q9UHR4 511 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 DMTF1Q9Y222 760 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 PLAAQ9Y263 795 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 VWA7Q9Y334 891 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 PCDHB3Q9Y5E6 796 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 PLXNA3P51805 1871 aa6.84□□□□□ -1.31
USP1-202ENST00000371146 TCRBV9S1A1TA0A576 114 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 FAM187AA6NFU0 413 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 WASH4PA8MWX3 477 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 CDC7O00311 574 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 B4GALT2O60909 372 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 CBFA2T3O75081 653 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 B3GALT4O96024 378 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 SERPINB3P29508 390 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 SLC19A1P41440 591 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 RAP1GDS1P52306 607 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 BLVRAP53004 296 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 IRF8Q02556 426 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 GPR18Q14330 331 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 NR1D2Q14995 579 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 C18orf21Q32NC0 220 aaPredicted RBP6.84□□□□□ -1.32
USP1-202ENST00000371146 CCSMST1Q4G0I0 132 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 TMEM259Q4ZIN3 620 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 LDLRAP1Q5SW96 308 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 NEK5Q6P3R8 708 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 IL27RAQ6UWB1 636 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 SLC9B2Q86UD5 537 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 SLC44A2Q8IWA5 706 aaPredicted RBP6.84□□□□□ -1.32
USP1-202ENST00000371146 PHTF2Q8N3S3 785 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 ATL1Q8WXF7 558 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 STARD8Q92502 1023 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 JADE3Q92613 823 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 CDK15Q96Q40 435 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 OR6C1Q96RD1 312 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 PAFAH2Q99487 392 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 C1QTNF2Q9BXJ5 285 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 STRADBQ9C0K7 418 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 TRIT1Q9H3H1 467 aaKnown RBP6.84□□□□□ -1.32
USP1-202ENST00000371146 PDFQ9HBH1 243 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 SLC39A1Q9NY26 324 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 NKIRAS1Q9NYS0 192 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 TMEM9Q9P0T7 183 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 DLGAP2Q9P1A6 1054 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 GALPQ9UBC7 116 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 ACOT9Q9Y305 439 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 LTBP2Q14767 1821 aa6.84□□□□□ -1.32
USP1-202ENST00000371146 PDCD11Q14690 1871 aaKnown RBP6.84□□□□□ -1.32
USP1-202ENST00000371146 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 DUX1O43812 170 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 AHSGP02765 367 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 HOXB3P14651 431 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 DDX5P17844 614 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 PGAM1P18669 254 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PTGER1P34995 402 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 OR1D4P47884 311 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 GABREP78334 506 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 MORF4L2Q15014 288 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 NR0B2Q15466 257 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 UBAP2Q5T6F2 1119 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 KDELC1Q6UW63 502 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 CERS6Q6ZMG9 384 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 WDR5BQ86VZ2 330 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 SLC22A18ASQ8N1D0 253 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 EFCAB3Q8N7B9 438 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ZNF614Q8N883 585 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ZNF473Q8WTR7 871 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 EFHD2Q96C19 240 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 CNDP1Q96KN2 507 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 OLFM3Q96PB7 478 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 INSM2Q96T92 566 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 MTERF1Q99551 399 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 CCM2Q9BSQ5 444 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 HDAC8Q9BY41 377 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 CCDC177Q9NQR7 707 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 SENP1Q9P0U3 644 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 STOML2Q9UJZ1 356 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 NUP214P35658 2090 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 GREB1Q4ZG55 1949 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ESPL1Q14674 2120 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PSMD12O00232 456 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 FANCGO15287 622 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ERAL1O75616 437 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 MMP2P08253 660 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ATP6V1C1P21283 382 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 HMOX2P30519 316 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms