RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PSMB5P28074 263 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 CASQ1P31415 396 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 CARSP49589 748 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 CDKN2DP55273 166 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 YBX1P67809 324 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 MRPS25P82663 173 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 FASTKD3Q14CZ7 662 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 SF1Q15637 639 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 RBM20Q5T481 1227 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 DUPD1Q68J44 220 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 MCATQ8IVS2 390 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 LRRC56Q8IYG6 542 aaPredicted RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 SYTL1Q8IYJ3 562 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 ADAMTS17Q8TE56 1095 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 DLG3Q92796 817 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 GBP5Q96PP8 586 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 NDNQ99608 321 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 DPH2Q9BQC3 489 aaPredicted RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 NLNQ9BYT8 704 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 FAM114A2Q9NRY5 505 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 GRHL1Q9NZI5 618 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 WHRNQ9P202 907 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 SLC17A6Q9P2U8 582 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 TSR3Q9UJK0 312 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 TUBD1Q9UJT1 453 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 FARSAQ9Y285 508 aaKnown RBP19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 KCNMB2Q9Y691 235 aa19.73■□□□□ 0.75
SMNDC1-201ENST00000369592 CTSVO60911 334 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 VPS26AO75436 327 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 ONECUT2O95948 504 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 CATP04040 527 aaKnown RBP19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 POLE2P56282 527 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 RPS18P62269 152 aaKnown RBP19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 UGT8Q16880 541 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 C16orf46Q6P387 395 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 TLDC1Q6P9B6 456 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 SYVN1Q86TM6 617 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 CPNE9Q8IYJ1 553 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 GPR135Q8IZ08 494 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 RAB42Q8N4Z0 105 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 ZNF480Q8WV37 535 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 CLIP3Q96DZ5 547 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 MCMBPQ9BTE3 642 aa19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 INTS7Q9NVH2 962 aaKnown RBP19.72■□□□□ 0.75
SMNDC1-201ENST00000369592 OR2A25A4D2G3 310 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 E7ENX8 843 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 ZSCAN9O15535 394 aaPredicted RBP19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 TSPAN12O95859 305 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 SLC16A8O95907 504 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 SFTPCP11686 197 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 HSD17B2P37059 387 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 CCR10P46092 362 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 TAP2Q03519 686 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 IL10RAQ13651 578 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 ERV3-1Q14264 604 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 DEFB109BQ30KR1 87 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 PTCHD3Q3KNS1 767 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 PIWIL4Q7Z3Z4 852 aaKnown RBP19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 GABPB2Q8TAK5 448 aaPredicted RBP19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 PROKR1Q8TCW9 393 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 APOBEC4Q8WW27 367 aaKnown RBP19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 SMPDL3AQ92484 453 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 CFAP36Q96G28 342 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 ARHGAP9Q9BRR9 750 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 CORO1CQ9ULV4 474 aaPredicted RBP19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 PCSK5Q92824 1860 aa19.71■□□□□ 0.75
SMNDC1-201ENST00000369592 IGKV1-8A0A0C4DH67 115 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 FITM1A5D6W6 292 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 NDC80O14777 642 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 NRP2O60462 931 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 ITGAXP20702 1163 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 MCM3P25205 808 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 PNLIPRP1P54315 467 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 RPS15P62841 145 aaKnown RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 C2orf54Q08AI8 447 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 PDIA2Q13087 525 aaKnown RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 PAQR3Q6TCH7 311 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 LURAP1LQ8IV03 231 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 ANKMY2Q8IV38 441 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 ZNF655Q8N720 491 aaPredicted RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 ENDOVQ8N8Q3 282 aaKnown RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 BBOF1Q8ND07 529 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 EEF1AKMT1Q8WVE0 214 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 SEC14L1Q92503 715 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 MIPEPQ99797 713 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 SLC6A20Q9NP91 592 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 TAS2R13Q9NYV9 303 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 TRMT6Q9UJA5 497 aaKnown RBP19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 TCFL5Q9UL49 500 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 SRPK3Q9UPE1 567 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 POLHQ9Y253 713 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 PSAT1Q9Y617 370 aa19.7■□□□□ 0.74
SMNDC1-201ENST00000369592 B8ZZF3 427 aa19.69■□□□□ 0.74
SMNDC1-201ENST00000369592 KLF7O75840 302 aaPredicted RBP19.69■□□□□ 0.74
SMNDC1-201ENST00000369592 FDXRP22570 491 aa19.69■□□□□ 0.74
SMNDC1-201ENST00000369592 NFKB2Q00653 900 aa19.69■□□□□ 0.74
SMNDC1-201ENST00000369592 KCNC4Q03721 635 aa19.69■□□□□ 0.74
SMNDC1-201ENST00000369592 KCNAB2Q13303 367 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms