RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 COL21A1Q96P44 957 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 KCNC2Q96PR1 638 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 CHID1Q9BWS9 393 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 AMBNQ9NP70 447 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 TPD52L2O43399 206 aaKnown RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 TRIM3O75382 744 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 ENGP17813 658 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 PUM1Q14671 1186 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 PUS10Q3MIT2 529 aaKnown RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 MBOAT1Q6ZNC8 495 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 TAS1R3Q7RTX0 852 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 NUP54Q7Z3B4 507 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF599Q96NL3 588 aa12.6□□□□□ -0.39
PTPRK-207ENST00000368226 GPATCH1Q9BRR8 931 aaKnown RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 CADM1Q9BY67 442 aaKnown RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
PTPRK-207ENST00000368226 ELOA3DA6NLF2 546 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 GRXCR1A8MXD5 290 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 DNM1LO00429 736 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 DNAJA2O60884 412 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RFPL2O75678 378 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 CBLP22681 906 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PTGES3Q15185 160 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ELOA3BQ3SY89 546 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ELOA3Q8NG57 546 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 OR4F6Q8NGB9 312 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TFGQ92734 400 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TRIM39Q9HCM9 518 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 GDAP2Q9NXN4 497 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RNF11Q9Y3C5 154 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 OR1I1O60431 355 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 LEFTY1O75610 366 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 IFNA6P05013 189 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF823P16415 610 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 POLR2CP19387 275 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 SLC7A1P30825 629 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ETV3P41162 512 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PGGT1BP53609 377 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 BNIP1Q12981 228 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 KHDC1Q4VXA5 237 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 CAND1Q86VP6 1230 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 CMASQ8NFW8 434 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 OR52B2Q96RD2 323 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 C16orf70Q9BSU1 422 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RAB11FIP5Q9BXF6 653 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ARHGEF33A8MVX0 844 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 SCELO95171 688 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TTKP33981 857 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TAS2R50P59544 299 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 TRAP1Q12931 704 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 KCTD8Q6ZWB6 473 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RGMAQ96B86 450 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF860A6NHJ4 632 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 EIF1AXP47813 144 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 AQP4P55087 323 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 KCNJ11Q14654 390 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF846Q147U1 533 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 GPR33Q49SQ1 333 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ZCCHC12Q6PEW1 402 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 PKP4Q99569 1192 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 IFT80Q9P2H3 777 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 IRAK3Q9Y616 596 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 ADAMDEC1O15204 470 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 KCNJ5P48544 419 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 CRISP3P54108 245 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RPS13P62277 151 aaKnown RBP12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 RASSF6Q6ZTQ3 369 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 USP30Q70CQ3 517 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
PTPRK-207ENST00000368226 A0A1W2PP55 124 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 PAK4O96013 591 aaPredicted RBP12.58□□□□□ -0.39
PTPRK-207ENST00000368226 NRG3P56975 720 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 TXNL4AP83876 142 aaKnown RBP12.58□□□□□ -0.39
PTPRK-207ENST00000368226 C1orf61Q13536 156 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 CYP1B1Q16678 543 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 ASTE1Q2TB18 679 aaPredicted RBP12.58□□□□□ -0.39
PTPRK-207ENST00000368226 OR2AJ1Q8NGZ0 328 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 DOK4Q8TEW6 326 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 COQ8BQ96D53 544 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms