RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 HES6Q96HZ4 224 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 PRRG4Q9BZD6 226 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 TRPV4Q9HBA0 871 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 FAM207AQ9NSI2 230 aaPredicted RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 INTS10Q9NVR2 710 aaKnown RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 FLRT3Q9NZU0 649 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 TNNQ9UQP3 1299 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 HEG1Q9ULI3 1381 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 ARPC2O15144 300 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 DFFBO76075 338 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 EML2O95834 649 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 PDGFRAP16234 1089 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 EPCAMP16422 314 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 CDC25CP30307 473 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 CSTF2P33240 577 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 CRKLP46109 303 aaKnown RBP3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 CLDN15P56746 228 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 KCNJ10P78508 379 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 RASGEF1BQ0VAM2 473 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 TFCP2Q12800 502 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 PSMD6Q15008 389 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 NPTX1Q15818 432 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 LACTB2Q53H82 288 aaPredicted RBP3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 C20orf194Q5TEA3 1177 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 ARHGAP11AQ6P4F7 1023 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 OR10Q1Q8NGQ4 319 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 NSMAFQ92636 917 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 PROX1Q92786 737 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 LGALS12Q96DT0 336 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 PIGQQ9BRB3 760 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 CPVLQ9H3G5 476 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 TXLNGQ9NUQ3 528 aa3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.82□□□□□ -1.8
RNU6-560P-201ENST00000364007 HMBSP08397 361 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 IFNAR1P17181 557 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 ALDH1B1P30837 517 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 PRKCIP41743 596 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 VAMP7P51809 220 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 NR0B1P51843 470 aaKnown RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 KRTAP10-9P60411 292 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 PPARDQ03181 441 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 NONOQ15233 471 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 PHKG1Q16816 387 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 LBHQ53QV2 105 aaPredicted RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 SPECC1Q5M775 1068 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 SLC35D3Q5M8T2 416 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 C6orf136Q5SQH8 315 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 SHQ1Q6PI26 577 aaKnown RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 KIRREL3Q8IZU9 778 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 TMEM178AQ8NBL3 297 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 CTCFLQ8NI51 663 aaPredicted RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 SPATA33Q96N06 139 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 RAB3IPQ96QF0 476 aaPredicted RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 MGME1Q9BQP7 344 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 GTPBP2Q9BX10 602 aaKnown RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 ATP13A3Q9H7F0 1226 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 XAB2Q9HCS7 855 aaKnown RBP3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 PFDN4Q9NQP4 134 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 GSN-AS1Q9NRJ2 163 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 TXNDC16Q9P2K2 825 aa3.81□□□□□ -1.8
RNU6-560P-201ENST00000364007 A0A087X002 238 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 MSGN1A6NI15 193 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ANXA2P2A6NMY6 339 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 FAM86B1E9PN63 330 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 CCDC188H7C350 402 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 CCL24O00175 119 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ZG16O60844 167 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 CDC123O75794 336 aaPredicted RBP3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 FAM86B2P0C5J1 330 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 GLULP15104 373 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 LHCGRP22888 699 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ACAT1P24752 427 aaKnown RBP3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 GP5P40197 560 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 MAGEA11P43364 429 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 HERV-K104P61576 105 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 DLK1P80370 383 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 PTGISQ16647 500 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 CTU2Q2VPK5 515 aaKnown RBP3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 FAM133BQ5BKY9 247 aaKnown RBP3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 XKR6Q5GH73 641 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 OR4A47Q6IF82 309 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 CAVIN1Q6NZI2 390 aaKnown RBP3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ZNF790Q6PG37 636 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 DCLRE1AQ6PJP8 1040 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 TMEM207Q6UWW9 146 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ABI3BPQ7Z7G0 1075 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 KLHDC1Q8N7A1 406 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 RASGEF1AQ8N9B8 481 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 LRR1Q96L50 414 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 RMDN2Q96LZ7 410 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 EGFL8Q99944 293 aa3.8□□□□□ -1.8
RNU6-560P-201ENST00000364007 ZMYND12Q9H0C1 365 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms