RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CLIP4Q8N3C7 705 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 SPATA22Q8NHS9 363 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 KIF18AQ8NI77 898 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 TANKQ92844 425 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 NXNL1Q96CM4 212 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 HDAC11Q96DB2 347 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 SIPA1Q96FS4 1042 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 SCMH1Q96GD3 660 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 MS4A10Q96PG2 267 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 CTAGE1Q96RT6 745 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 OLFM1Q99784 485 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 ADPGKQ9BRR6 497 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 ALDH8A1Q9H2A2 487 aaPredicted RBP5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 IL17BQ9UHF5 180 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 PCDHA7Q9UN72 937 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 AMDHD2Q9Y303 409 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 MROH7Q68CQ1 1323 aa5.4□□□□□ -1.55
RNU4-39P-201ENST00000362455 ATAD5Q96QE3 1844 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 CD8B2A6NJW9 211 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 TO15178 435 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 SSX4O60224 188 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 PRSS2P07478 247 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 LINGO3P0C6S8 592 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ERCC2P18074 760 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 SCP2P22307 547 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 PTAFRP25105 342 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 CCR10P46092 362 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF155Q12901 538 aaPredicted RBP5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 TRAF2Q12933 501 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 MYBPHQ13203 477 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 SCARB2Q14108 478 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 NFATC4Q14934 902 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 RAB6CQ53S08 254 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 GAGE2AQ6NT46 116 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 RHBDF2Q6PJF5 856 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 FIGLAQ6QHK4 219 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 Q75L30 129 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMCO2Q7Z6W1 182 aaPredicted RBP5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 CENPVQ7Z7K6 275 aaPredicted RBP5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 TLK2Q86UE8 772 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF575Q86XF7 245 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 FBXO16Q8IX29 292 aaPredicted RBP5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF114Q8NC26 417 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZFAND2BQ8WV99 257 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMED6Q8WW62 240 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 PIGTQ969N2 578 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 ARSGQ96EG1 525 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 NUP85Q9BW27 656 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 RAB6CQ9H0N0 254 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 SEMA6AQ9H2E6 1030 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 NOL11Q9H8H0 719 aaKnown RBP5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 EQTNQ9NQ60 294 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 OCIAD1Q9NX40 245 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 KLHL9Q9P2J3 617 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 SIX4Q9UIU6 781 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 NFS1Q9Y697 457 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 MUC6Q6W4X9 2439 aa5.39□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR2M5A3KFT3 312 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 HEPACAM2A8MVW5 462 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 PI4K2BG5E9Z4 385 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 NMT2O60551 498 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 CABYRO75952 493 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 RECQL5O94762 991 aaPredicted RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 LINC00271P0C7V0 271 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 FDPSP14324 419 aaKnown RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 IFNAR1P17181 557 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 MCCP23508 829 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 CDK3Q00526 305 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 DNAJB7Q7Z6W7 309 aaPredicted RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 C1orf87Q8N0U7 546 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 C1orf52Q8N6N3 182 aaKnown RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 SMRP1Q8NCR6 262 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 GMCL1P1Q8NEA9 526 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 PPP4R1Q8TF05 950 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 ARNTL2Q8WYA1 636 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 ABTB1Q969K4 478 aaPredicted RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 MIB2Q96AX9 1013 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 RAB3IPQ96QF0 476 aaPredicted RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR6C1Q96RD1 312 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 C16orf70Q9BSU1 422 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 ABHD6Q9BV23 337 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC25A23Q9BV35 468 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 PRMT7Q9NVM4 692 aaPredicted RBP5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 CYP39A1Q9NYL5 469 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF224Q9NZL3 707 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 RNF7Q9UBF6 113 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 FRMPD3Q5JV73 1810 aa5.38□□□□□ -1.55
RNU4-39P-201ENST00000362455 SMCHD1A6NHR9 2005 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 A0A1W2PPM1 405 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 CLEC18AA5D8T8 446 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM178BH3BS89 294 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 GPAA1O43292 621 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 IQCF3P0C7M6 154 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms