RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ATG10Q9H0Y0 220 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ABCB10Q9NRK6 738 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 C1orf109Q9NX04 203 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PDP1Q9P0J1 537 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 LHX3Q9UBR4 397 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 C3orf18Q9UK00 162 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CPSF4O95639 269 aaKnown RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 ABCB1P08183 1280 aaPredicted RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 SLC11A1P49279 550 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CYP4F2P78329 520 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 KCNC4Q03721 635 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ZNF362Q5T0B9 420 aaPredicted RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 ADAMTSL2Q86TH1 951 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 SLC22A16Q86VW1 577 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 VRK3Q8IV63 474 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 APCDD1Q8J025 514 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 MFSD4AQ8N468 514 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 PROX1Q92786 737 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CPPED1Q9BRF8 314 aaPredicted RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 ADGRE3Q9BY15 652 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CD244Q9BZW8 370 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 TMEM184CQ9NVA4 438 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 SLC6A14Q9UN76 642 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 A0A1W2PQ45 241 aaPredicted RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 A0A1W2PQY0 241 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 TBL1XO60907 577 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 LINC00271P0C7V0 271 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ACPPP15309 386 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 PTPN6P29350 595 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 HOXA9P31269 272 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 KRT20P35900 424 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 GZMMP51124 257 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CDH4P55283 916 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CREMQ03060 361 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CLCA4Q14CN2 919 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 PDE12Q6L8Q7 609 aaKnown RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ADCK1Q86TW2 530 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ADHFE1Q8IWW8 467 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ZCCHC7Q8N3Z6 543 aaKnown RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 SELENOMQ8WWX9 145 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 PYURFQ96I23 114 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CCDC115Q96NT0 180 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 C8orf4Q9NR00 106 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 TAS2R16Q9NYV7 291 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CD84Q9UIB8 345 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 DNMT3LQ9UJW3 386 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 POU2F3Q9UKI9 436 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 TRBV5-3A0A0A0MS03 114 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 FKBP9O95302 570 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 OPN1SWP03999 348 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 MRPL19P49406 292 aaKnown RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 HSPA14Q0VDF9 509 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 TP53BP2Q13625 1128 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 CACHD1Q5VU97 1274 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 NCEH1Q6PIU2 408 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 FKBP9P1Q75LS8 142 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ANKRD13BQ86YJ7 626 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 FAM126AQ9BYI3 521 aaPredicted RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 GMPPBQ9Y5P6 360 aa10.3□□□□□ -0.76
SMC3-201ENST00000361804 MTCL1Q9Y4B5 1905 aaKnown RBP10.3□□□□□ -0.76
SMC3-201ENST00000361804 DNTTP04053 509 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 NTRK1P04629 796 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 S100A3P33764 101 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 MAGEA8P43361 318 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 SLC11A2P49281 568 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 RPS14P62263 151 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 CACNG1Q06432 222 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 TUBA3CQ13748 450 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 PIK3C3Q8NEB9 887 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 KCNC2Q96PR1 638 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 KLHL25Q9H0H3 589 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 OLA1Q9NTK5 396 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 GIN1Q9NXP7 522 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 GFRA2O00451 464 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 AQP9O43315 295 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 FAM20BO75063 409 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 HPRP00739 348 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 NPPAP01160 153 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 BPIP17213 487 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 SDC1P18827 310 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 ITIH1P19827 911 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 MSH3P20585 1137 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 GTF2E2P29084 291 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 CSKP41240 450 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 TMED10P49755 219 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 PLD1Q13393 1074 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 NFATC2Q13469 925 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 SPATS1Q496A3 300 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 C5orf22Q49AR2 442 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 COLEC12Q5KU26 742 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 ZNF621Q6ZSS3 439 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 SLC24A5Q71RS6 500 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 P2RY8Q86VZ1 359 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 CACTIN-AS1Q8N1I8 211 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms