RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 MS4A12Q9NXJ0 267 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 TMEM181Q9P2C4 612 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 CENPBD1B2RD01 187 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 MANBAO00462 879 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 IRAK2O43187 625 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 HNRNPFP52597 415 aaKnown RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 MSANTD2Q6P1R3 559 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 TMEM135Q86UB9 458 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 GJD3Q8N144 294 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 GPC2Q8N158 579 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 ZNF717Q9BY31 904 aaPredicted RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 NUAK1O60285 661 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CD1DP15813 335 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CASP9P55211 416 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 SLC9A5Q14940 896 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 SPANXN4Q5MJ08 99 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 PRAMEF19Q5SWL8 479 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 KANK2Q63ZY3 851 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CHPFQ8IZ52 775 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CDKN2AIPNLQ96HQ2 116 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CCDC3Q9BQI4 270 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 ENPP5Q9UJA9 477 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 PPEF2O14830 753 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 ANKRD26P1Q6NSI1 321 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 LINGO4Q6UY18 593 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 BEND5Q7L4P6 421 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 LINGO2Q7L985 606 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 SH3YL1Q96HL8 342 aaPredicted RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 CCDC32Q9BV29 185 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
SMC5-201ENST00000361138 MED11Q9P086 117 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 NME4O00746 187 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 UPK1BO75841 260 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 TFAP2AP05549 437 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 TCEA1P23193 301 aaKnown RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMC5-201ENST00000361138 BMXP51813 675 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 SLC10A7Q0GE19 358 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 CBLBQ13191 982 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 COQ5Q5HYK3 327 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 RAET1GQ6H3X3 334 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 OAFQ86UD1 273 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 TMLHEQ9NVH6 421 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 ZNF780BQ9Y6R6 833 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 KPNA3O00505 521 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 PEPDP12955 493 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 CD247P20963 164 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 ZBTB6Q15916 424 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 OLFML2AQ68BL7 652 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 PGBD2Q6P3X8 592 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 COMMD2Q86X83 199 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 SLC29A3Q9BZD2 475 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 AIG1Q9NVV5 245 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 PAPSS2O95340 614 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 GSTT2P0CG29 244 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 GSTT2BP0CG30 244 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 TLX1P31314 330 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 PNLIPRP1P54315 467 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 AKAP1Q92667 903 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMC5-201ENST00000361138 NSUN5Q96P11 429 aaKnown RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 MAGIXQ9H6Y5 334 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 EMCNQ9ULC0 261 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 REM1O75628 298 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 GLUD1P00367 558 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 GPR1P46091 355 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 PGGT1BP53609 377 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 NCS1P62166 190 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 TMEM44Q2T9K0 475 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 PEG10Q86TG7 708 aaKnown RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 MARCH9Q86YJ5 346 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 ZNF433Q8N7K0 673 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 AQP11Q8NBQ7 271 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 JPH3Q8WXH2 748 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 C3orf14Q9HBI5 128 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 EVLQ9UI08 416 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 HSPE1-MOB4S4R3N1 261 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 DFNA5O60443 496 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 BCAS1O75363 584 aaPredicted RBP13.62□□□□□ -0.23
SMC5-201ENST00000361138 OPN1SWP03999 348 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 CD52P31358 61 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 HTR2BP41595 481 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 OR4D2P58180 307 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 DSG4Q86SJ6 1040 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 PHC2Q8IXK0 858 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 ZFP3Q96NJ6 502 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 NPY6RQ99463 290 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms