RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 DPY19L1Q2PZI1 675 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 RUNDC3AQ59EK9 446 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 VITQ6UXI7 678 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 NUDT18Q6ZVK8 323 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 RALGPS2Q86X27 583 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 TRAPPC5Q8IUR0 188 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 WDR20Q8TBZ3 569 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 BIRC7Q96CA5 298 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 MED8Q96G25 268 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 ITCHQ96J02 903 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 CIB1Q99828 191 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 FAM192AQ9GZU8 254 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 BRF2Q9HAW0 419 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 CDH7Q9ULB5 785 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 COLQQ9Y215 455 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 NEUROG3Q9Y4Z2 214 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
PDLIM7-203ENST00000359895 C1orf105O95561 183 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CDH1P12830 882 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 GGT1P19440 569 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 OXTRP30559 389 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 IL12RB1P42701 662 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 POLE2P56282 527 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 LRIF1Q5T3J3 769 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 ATG9BQ674R7 924 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 NOXRED1Q6NXP6 359 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 MMAAQ8IVH4 418 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CFAP206Q8IYR0 622 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 TMEM132CQ8N3T6 1108 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 LILRA3Q8N6C8 439 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CLHC1Q8NHS4 586 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 HM13Q8TCT9 377 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 NUDT8Q8WV74 236 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 POP5Q969H6 163 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 APIPQ96GX9 242 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 ZNF583Q96ND8 569 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 GBP5Q96PP8 586 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 THUMPD3Q9BV44 507 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 PRSS16Q9NQE7 514 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 MAPRE3Q9UPY8 281 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 RUVBL1Q9Y265 456 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 PCDHGA11Q9Y5H2 935 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 TRBV5-3A0A0A0MS03 114 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 E7EQ34 232 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 MYO1DO94832 1006 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 SLC16A8O95907 504 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 EPHX1P07099 455 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 C7P10643 843 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 PSMC3P17980 439 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 PRPS1L1P21108 318 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 PDHA2P29803 388 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 GJA4P35212 333 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CCT8P50990 548 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 E2F2Q14209 437 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 SHHQ15465 462 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 NRF1Q16656 503 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 SLC44A4Q53GD3 710 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 TMTC4Q5T4D3 741 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 C6orf52Q5T4I8 152 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 C10orf62Q5T681 223 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CAPN13Q6MZZ7 669 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 OR2T12Q8NG77 320 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 STARD8Q92502 1023 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 REPS1Q96D71 796 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 HIC2Q96JB3 615 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 APOLD1Q96LR9 279 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 CNBD2Q96M20 576 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 TSSK3Q96PN8 268 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 DPEP2Q9H4A9 486 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 GORASP2Q9H8Y8 452 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 SPATA6Q9NWH7 488 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 ATXN10Q9UBB4 475 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 VPS29Q9UBQ0 182 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 FADS3Q9Y5Q0 445 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 KCNE2Q9Y6J6 123 aa17.74■□□□□ 0.43
PDLIM7-203ENST00000359895 DOCK8Q8NF50 2099 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 C7orf72A4D263 438 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 K7ESM1 405 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 PLK4O00444 970 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 GSTA4O15217 222 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 KAT7O95251 611 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 TNFAIP8O95379 198 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 FAM58BPP0C7Q3 252 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 CD22P20273 847 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 P2RY2P41231 377 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 TXNL4AP83876 142 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 PLIN5Q00G26 463 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 ATP6AP1Q15904 470 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 CCSMST1Q4G0I0 132 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 TRIM74Q86UV6 250 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 GPR180Q86V85 440 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 RIMKLAQ8IXN7 391 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 DTWD1Q8N5C7 304 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 MFSD2AQ8NA29 543 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 OR52E4Q8NGH9 312 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 OR2L2Q8NH16 312 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms