RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 AURKBQ96GD4 344 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MLXQ9UH92 298 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 OAZ3Q9UMX2 235 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 GLI3P10071 1580 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 A0A0X1KG70 313 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 NUDT1P36639 197 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 RIPPLY1Q0D2K3 151 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 OTOP2Q7RTS6 562 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 STX12Q86Y82 276 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 OR10G2Q8NGC3 310 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 DNASE1L2Q92874 299 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 RDH12Q96NR8 316 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 HLA-DQB2P05538 268 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ATXN1P54253 815 aaKnown RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MOGQ16653 247 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 LINGO4Q6UY18 593 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 DCBLD1Q8N8Z6 715 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CLEC4CQ8WTT0 213 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 SLC22A18Q96BI1 424 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 EBPLQ9BY08 206 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 POPDC3Q9HBV1 291 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 EQTNQ9NQ60 294 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 PGAP2Q9UHJ9 254 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 PCDHGB7Q9Y5F8 929 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MYH3P11055 1940 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 SCN2BO60939 215 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ECI2O75521 394 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CCND3P30281 292 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CRISP3P54108 245 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 PRR23CQ6ZRP0 262 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 SLITRK4Q8IW52 837 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CENPSQ8N2Z9 138 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF420Q8TAQ5 688 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 SMOC2Q9H3U7 446 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF358Q9NW07 568 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ZDHHC2Q9UIJ5 367 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 NUP98P52948 1817 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 TYROBPO43914 113 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 PIM1P11309 404 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MTHFD1P11586 935 aaKnown RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CKMT2P17540 419 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 GSTM3P21266 225 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 AP1S2P56377 157 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 NFKB2Q00653 900 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ILF3Q12906 894 aaKnown RBP eCLIP11.94□□□□□ -0.59e-7■■■□□ 18.7
DNMT1-202ENST00000359526 CRTC2Q53ET0 693 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 GALNT13Q8IUC8 556 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CFAP206Q8IYR0 622 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 STON2Q8WXE9 905 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 CLIP3Q96DZ5 547 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MGME1Q9BQP7 344 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 TRMT61BQ9BVS5 477 aaKnown RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ITPAQ9BY32 194 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 BRINP2Q9C0B6 783 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 C11orf16Q9NQ32 467 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
DNMT1-202ENST00000359526 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 SIRPGQ9P1W8 387 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 IKZF2Q9UKS7 526 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
DNMT1-202ENST00000359526 NRAPQ86VF7 1730 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 TJP1Q07157 1748 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 A0A1W2PP18 115 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 HMGN1P05114 100 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SLC6A4P31645 630 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 CDH15P55291 814 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SCARB2Q14108 478 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 CARD16Q5EG05 197 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 PAQR3Q6TCH7 311 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 OR10G6Q8NH81 332 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 TMBIM1Q969X1 311 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 PKP2Q99959 881 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 EFCAB11Q9BUY7 163 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 ABI3Q9P2A4 366 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
DNMT1-202ENST00000359526 STBD1O95210 358 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SNX4O95219 450 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 PPP2R2BQ00005 443 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 GALNT2Q10471 571 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 TSC22D1Q15714 1073 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 OR2T5Q6IEZ7 315 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 SLC51AQ86UW1 340 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 UBE2J2Q8N2K1 259 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 OR2T29Q8NH02 315 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 MAPKAP1Q9BPZ7 522 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 CDADC1Q9BWV3 514 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 DERL2Q9GZP9 239 aa11.93□□□□□ -0.5
DNMT1-202ENST00000359526 POLR2J3Q9H1A7 115 aaKnown RBP11.93□□□□□ -0.5
DNMT1-202ENST00000359526 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms