RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 MYO3AQ8NEV4 1616 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 STK16O75716 305 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ARSAP15289 507 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 IL12AP29459 219 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ELP6Q0PNE2 266 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TMEM115Q12893 351 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 DHDDSQ86SQ9 333 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 RPS6KA6Q9UK32 745 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ACVR2AP27037 513 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ALDH3A2P51648 485 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ADARP55265 1226 aaKnown RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 FBXL22Q6P050 247 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ADAMTSL2Q86TH1 951 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ELOA2Q8IYF1 753 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 COQ8AQ8NI60 647 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 NUSAP1Q9BXS6 441 aaKnown RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 COPG2Q9UBF2 871 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 RNF11Q9Y3C5 154 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 HLA-DQB2P05538 268 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ETV3P41162 512 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CCR3P51677 355 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CHRNEQ04844 493 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ITIH4Q14624 930 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ZNF846Q147U1 533 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SLC15A3Q8IY34 581 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ANKRD7Q92527 254 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TMEM125Q96AQ2 219 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TCF7L1Q9HCS4 588 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 UPB1Q9UBR1 384 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ELOVL7A1L3X0 281 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 LOC110117498-PIK3R3F6TDL0 507 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TRIM38O00635 465 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 AURKAO14965 403 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GRID2O43424 1007 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 STX11O75558 287 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 XRCC1P18887 633 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 IL1R2P27930 398 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SFTPDP35247 375 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ARHGAP1Q07960 439 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 MZT2AQ6P582 158 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 VSTM1Q6UX27 236 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PSD4Q8NDX1 1056 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 COX4I2Q96KJ9 171 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SNX27Q96L92 541 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SMIM14Q96QK8 99 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CLCC1Q96S66 551 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 DTLQ9NZJ0 730 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GRIP1Q9Y3R0 1128 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ARHGEF40Q8TER5 1519 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GLI2P10070 1586 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PTPRMP28827 1452 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 C5orf60A6NFR6 353 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PEX14O75381 377 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CYB5AP00167 134 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 HSF2Q03933 536 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SNTA1Q13424 505 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ARMC3Q5W041 872 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 DPY19L4Q7Z388 723 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 LRRC52Q8N7C0 313 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PROKR2Q8NFJ6 384 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 OR2L8Q8NGY9 312 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 C1orf216Q8TAB5 229 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TIFAQ96CG3 184 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ELF4Q99607 663 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 IFT46Q9NQC8 304 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GDF3Q9NR23 364 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 LRRIQ1Q96JM4 1722 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TRAFD1O14545 582 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TLX3O43711 291 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 RB1P06400 928 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CKMT1AP12532 417 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GJA8P48165 433 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 HEPACAMQ14CZ8 416 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 BRMS1LQ5PSV4 323 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SLC2A7Q6PXP3 512 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CLEC20AQ6ZU45 233 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CXXC5Q7LFL8 322 aaKnown RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 FAM163AQ96GL9 167 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ALPK1Q96QP1 1244 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ZIC5Q96T25 663 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SUCNR1Q9BXA5 334 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GSKIPQ9P0R6 139 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PTGDR2Q9Y5Y4 395 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 COCHO43405 550 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SNX3O60493 162 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GALTP07902 379 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SULT2A1Q06520 285 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 PDK3Q15120 406 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 RAB6CQ53S08 254 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 LYPLAL1Q5VWZ2 237 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SHFQ7M4L6 423 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 REM2Q8IYK8 340 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 WDR20Q8TBZ3 569 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 FAM3CQ92520 227 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 RAB6CQ9H0N0 254 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 GDAP2Q9NXN4 497 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 DNMT3AQ9Y6K1 912 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms