RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CD40LGP29965 261 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 KIR3DL1P43629 444 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 RPIAP49247 311 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 CLK3P49761 638 aaKnown RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 CLCN7P51798 805 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 RPS3AP61247 264 aaKnown RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 RPP38P78345 283 aaKnown RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 VLDLRP98155 873 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 GATAD2AQ86YP4 633 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 HS6ST3Q8IZP7 471 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 HSH2DQ96JZ2 352 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 GPR62Q9BZJ7 368 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 SH3BP4Q9P0V3 963 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 DNMT3LQ9UJW3 386 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 RALGAPA2Q2PPJ7 1873 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 IGLV3-10A0A075B6K4 115 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 CLIC1O00299 241 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 ANXA5P08758 320 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 GATMP50440 423 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 COPZ1P61923 177 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 PHC1P78364 1004 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 CDH18Q13634 790 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 GPR149Q86SP6 731 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 ZBTB2Q8N680 514 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 FAM83FQ8NEG4 500 aaPredicted RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 MAL2Q969L2 176 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 CD244Q9BZW8 370 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 TNKS2Q9H2K2 1166 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
NCDN-201ENST00000356090 THUMPD1Q9NXG2 353 aaKnown RBP13.01□□□□□ -0.33
NCDN-201ENST00000356090 SCN4AP35499 1836 aa13□□□□□ -0.33
NCDN-201ENST00000356090 DRGXA6NNA5 263 aa13□□□□□ -0.33
NCDN-201ENST00000356090 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
NCDN-201ENST00000356090 ASGR1P07306 291 aa13□□□□□ -0.33
NCDN-201ENST00000356090 PCMT1P22061 227 aa13□□□□□ -0.33
NCDN-201ENST00000356090 SF3B4Q15427 424 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■■■■ 35.3
NCDN-201ENST00000356090 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
NCDN-201ENST00000356090 CLECL1Q8IZS7 167 aa13□□□□□ -0.33
NCDN-201ENST00000356090 RBFAQ8N0V3 343 aa13□□□□□ -0.33
NCDN-201ENST00000356090 GLB1L3Q8NCI6 653 aaPredicted RBP13□□□□□ -0.33
NCDN-201ENST00000356090 GPR156Q8NFN8 814 aa13□□□□□ -0.33
NCDN-201ENST00000356090 C8orf48Q96LL4 319 aa13□□□□□ -0.33
NCDN-201ENST00000356090 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ACOT13Q9NPJ3 140 aa13□□□□□ -0.33
NCDN-201ENST00000356090 MTX2O75431 263 aa13□□□□□ -0.33
NCDN-201ENST00000356090 GADD45AP24522 165 aa13□□□□□ -0.33
NCDN-201ENST00000356090 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
NCDN-201ENST00000356090 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■■□□ 18.5
NCDN-201ENST00000356090 MED22Q15528 200 aa13□□□□□ -0.33
NCDN-201ENST00000356090 TIGD6Q17RP2 521 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ZNF404Q494X3 552 aa13□□□□□ -0.33
NCDN-201ENST00000356090 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
NCDN-201ENST00000356090 SPATC1Q76KD6 591 aa13□□□□□ -0.33
NCDN-201ENST00000356090 UROC1Q96N76 676 aa13□□□□□ -0.33
NCDN-201ENST00000356090 TSEN34Q9BSV6 310 aaKnown RBP13□□□□□ -0.33
NCDN-201ENST00000356090 ACPTQ9BZG2 426 aa13□□□□□ -0.33
NCDN-201ENST00000356090 RAPGEFL1Q9UHV5 662 aa13□□□□□ -0.33
NCDN-201ENST00000356090 BRCA1P38398 1863 aaKnown RBP13□□□□□ -0.33
NCDN-201ENST00000356090 TBL1XO60907 577 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ERN1O75460 977 aaKnown RBP13□□□□□ -0.33
NCDN-201ENST00000356090 APOA1P02647 267 aa13□□□□□ -0.33
NCDN-201ENST00000356090 OR1E2P47887 323 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ARTNQ5T4W7 220 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ATAD3BQ5T9A4 648 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
NCDN-201ENST00000356090 SERINC5Q86VE9 423 aa13□□□□□ -0.33
NCDN-201ENST00000356090 APIPQ96GX9 242 aa13□□□□□ -0.33
NCDN-201ENST00000356090 Q96MT0 163 aa13□□□□□ -0.33
NCDN-201ENST00000356090 C14orf119Q9NWQ9 140 aa13□□□□□ -0.33
NCDN-201ENST00000356090 OGDHLQ9ULD0 1010 aa13□□□□□ -0.33
NCDN-201ENST00000356090 PMF1-BGLAPU3KQ54 211 aa13□□□□□ -0.33
NCDN-201ENST00000356090 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 TFECO14948 347 aaPredicted RBP12.99□□□□□ -0.33
NCDN-201ENST00000356090 SH3BP5O60239 455 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 KLK8O60259 260 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 CDH4P55283 916 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 CHRNA6Q15825 494 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
NCDN-201ENST00000356090 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 PJA1Q8NG27 643 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 FUBP3Q96I24 572 aaKnown RBP eCLIP12.99□□□□□ -0.33
NCDN-201ENST00000356090 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 PDFQ9HBH1 243 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 ZNF623O75123 536 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 CLDN11O75508 207 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
NCDN-201ENST00000356090 CA5AP35218 305 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 FCGRTP55899 365 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 SLC35A2P78381 396 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 ACOX1Q15067 660 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 TRIM60Q495X7 471 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 TPRG1LQ5T0D9 272 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 KIAA1614Q5VZ46 1190 aa12.99□□□□□ -0.33
NCDN-201ENST00000356090 UBE2R2Q712K3 238 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms