RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 UTS2RQ9UKP6 389 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 DUXAA6NLW8 204 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 CD247P20963 164 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 SPINT3P49223 89 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 CACNA2D1P54289 1103 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.89
GABPA-201ENST00000354828 ID2Q02363 134 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 NR0B2Q15466 257 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 TRIM61Q5EBN2 209 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 ERICH5Q6P6B1 374 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 PARM1Q6UWI2 310 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 APOOQ9BUR5 198 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 REXO4Q9GZR2 422 aaKnown RBP9.46□□□□□ -0.89
GABPA-201ENST00000354828 NEUROD4Q9HD90 331 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 SDHAF3Q9NRP4 125 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.46□□□□□ -0.89
GABPA-201ENST00000354828 PAPSS2O95340 614 aaPredicted RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 PROS1P07225 676 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 SERPINA6P08185 405 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 TSPAN19P0C672 248 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 PSMB9P28065 219 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 P2RY2P41231 377 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 SRP54P61011 504 aaKnown RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 TMED1Q13445 227 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 CYP1B1Q16678 543 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 NIPAL1Q6NVV3 410 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 TTLL10Q6ZVT0 673 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 ZNF527Q8NB42 609 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 FAM110BQ8TC76 370 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 ABTB1Q969K4 478 aaPredicted RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 DUSP23Q9BVJ7 150 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 STRA6Q9BX79 667 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 SLC40A1Q9NP59 571 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 SCN9AQ15858 1988 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 KLHL33A6NCF5 533 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 MAGEB17A8MXT2 336 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 GNB5O14775 395 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 TPD52L2O43399 206 aaKnown RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 CST1P01037 141 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 ITGB7P26010 798 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 HERVK_113P63132 956 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 BNIP2Q12982 314 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 MPP7Q5T2T1 576 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 RNF43Q68DV7 783 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 ZFP1Q6P2D0 407 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 GALNT18Q6P9A2 607 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 C12orf40Q86WS4 652 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 EID2Q8N6I1 236 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 DCAKDQ8WVC6 231 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 UHRF1Q96T88 793 aaPredicted RBP9.46□□□□□ -0.9
GABPA-201ENST00000354828 ERVK-6Q9BXR3 956 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 Q9N2J8 555 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 PRTFDC1Q9NRG1 225 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 ACTL7AQ9Y615 435 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 MYO7AQ13402 2215 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 BCORQ6W2J9 1755 aa9.46□□□□□ -0.9
GABPA-201ENST00000354828 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 FAM227AF5H4B4 570 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 TNFRSF10BO14763 440 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SMAD6O43541 496 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 COQ9O75208 318 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 CLEC3AO75596 197 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 TGDSO95455 350 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 ACRV1P26436 265 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 KCNJ11Q14654 390 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 PCBP2Q15366 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
GABPA-201ENST00000354828 KCNJ9Q92806 393 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SCRN2Q96FV2 425 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 MSANTD3Q96H12 275 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 DCLRE1BQ9H816 532 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 MCM8Q9UJA3 840 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 BBIP1A8MTZ0 92 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ZNF487B1APH4 448 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 LOC730098B7Z3J9 87 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 TRIM38O00635 465 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 KIF1CO43896 1103 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 PFDN1O60925 122 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 C8orf89P0DMQ9 161 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SLC6A4P31645 630 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 CSNK1EP49674 416 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 CLDN10P78369 228 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 MOGSQ13724 837 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ZNF267Q14586 743 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 TMEM31Q5JXX7 168 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 NEK10Q6ZWH5 1172 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 GAREM2Q75VX8 874 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 RMND5BQ96G75 393 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 IL17FQ96PD4 163 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 C17orf62Q9BQA9 187 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 RACGAP1Q9H0H5 632 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 GALPQ9UBC7 116 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 CCL26Q9Y258 94 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 FAM86C2PA6NEL3 165 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 PTGES3LE9PB15 166 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms