RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 CLPBQ9H078 707 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 SLC6A13Q9NSD5 602 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 WWOXQ9NZC7 414 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 KLHL42Q9P2K6 505 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 PSORS1C1Q9UIG5 152 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 POU2F3Q9UKI9 436 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ABCG2Q9UNQ0 655 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 H3BNC9 293 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ARVCFO00192 962 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 CLDN9O95484 217 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 C9P02748 559 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 RPLP0P05388 317 aaKnown RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 GPX2P18283 190 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 S100A5P33763 92 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 KDELR2P33947 212 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 LIMK1P53667 647 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 HMGCS1Q01581 520 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 MTAPQ13126 283 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 VEZF1Q14119 521 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 DNAJC14Q6Y2X3 702 aaPredicted RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 RBFAQ8N0V3 343 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 OR7D4Q8NG98 312 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 APH1BQ8WW43 257 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ATL1Q8WXF7 558 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ULK4Q96C45 1275 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 MAGEB10Q96LZ2 347 aaPredicted RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 REEP1Q9H902 201 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ZFP14Q9HCL3 533 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 LATS2Q9NRM7 1088 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 KIF17Q9P2E2 1029 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 LOC730098B7Z3J9 87 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 LOC110117498-PIK3R3F6TDL0 507 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 SYN3O14994 580 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 KCNK2O95069 426 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 MED26O95402 600 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF682O95780 498 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 LCKP06239 509 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 HMGCLP35914 325 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 GPR15P49685 360 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 BOP1Q14137 746 aaKnown RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 MAPK11Q15759 364 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 TPRG1LQ5T0D9 272 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 NCEH1Q6PIU2 408 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CHST9Q7L1S5 443 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PIK3R3Q92569 461 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 NELL1Q92832 810 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CRELD1Q96HD1 420 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 EGFL8Q99944 293 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 COPS4Q9BT78 406 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CIPCQ9C0C6 399 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PCDH12Q9NPG4 1184 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 SLCO3A1Q9UIG8 710 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 KLK4Q9Y5K2 254 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 M0R082 166 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 RFXANKO14593 260 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 HMBSP08397 361 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CBSLP0DN79 551 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CYP4B1P13584 511 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PTX3P26022 381 aaPredicted RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CBSP35520 551 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 GGT5P36269 586 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 LIPAP38571 399 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CASP3P42574 277 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 OLR1P78380 273 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 TAF10Q12962 218 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 DUOXA1Q1HG43 343 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 INO80DQ53TQ3 878 aaPredicted RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 P3H2Q8IVL5 708 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ZZZ3Q8IYH5 903 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ENTHD1Q8IYW4 607 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PAF1Q8N7H5 531 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 CHTF18Q8WVB6 975 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PYCR2Q96C36 320 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 POLE4Q9NR33 117 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 FARSBQ9NSD9 589 aaKnown RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
CAPN9-202ENST00000354537 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
CAPN9-202ENST00000354537 TDRD15B5MCY1 1934 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms