RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ARHGAP19Q14CB8 494 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 RPE65Q16518 533 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 AGKQ53H12 422 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 PRAMEF14Q5SWL7 426 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 PRAMEF13Q5VWM6 474 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 GK5Q6ZS86 529 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 RAB42Q8N4Z0 105 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 RBM15BQ8NDT2 890 aaKnown RBP19.88■□□□□ 0.77
TRIM4-202ENST00000354241 RP9Q8TA86 221 aaKnown RBP19.88■□□□□ 0.77
TRIM4-202ENST00000354241 KLHDC7BQ96G42 594 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 SPACA7Q96KW9 195 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 CAMK1GQ96NX5 476 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 MIPEPQ99797 713 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 TBC1D10AQ9BXI6 508 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 SH2B3Q9UQQ2 575 aa19.88■□□□□ 0.77
TRIM4-202ENST00000354241 COL6A3P12111 3177 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 ZNF839A8K0R7 811 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 AXIN1O15169 862 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 ERGP11308 486 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 MTHFD1P11586 935 aaKnown RBP19.87■□□□□ 0.77
TRIM4-202ENST00000354241 VARSP26640 1264 aaKnown RBP19.87■□□□□ 0.77
TRIM4-202ENST00000354241 HSD17B2P37059 387 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 NEK2P51955 445 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 HMGCS1Q01581 520 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 CUL3Q13618 768 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 HERC3Q15034 1050 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 RPS6KA2Q15349 733 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 AP5B1Q2VPB7 878 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 GRHL2Q6ISB3 625 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 TRIM46Q7Z4K8 759 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 HMGCLL1Q8TB92 370 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 PPP3R2Q96LZ3 170 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 MVB12BQ9H7P6 319 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 CAAP1Q9H8G2 361 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 TRNAU1APQ9NX07 287 aaKnown RBP19.87■□□□□ 0.77
TRIM4-202ENST00000354241 CCDC167Q9P0B6 97 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 CCL27Q9Y4X3 112 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 EML5Q05BV3 1969 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 PLXND1Q9Y4D7 1925 aa19.87■□□□□ 0.77
TRIM4-202ENST00000354241 SPTY2D1-AS1A0A0U1RR47 76 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 K7ESF4 209 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 EML2O95834 649 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 KRT16P08779 473 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 IDO1P14902 403 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 CD27P26842 260 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 HNF4AP41235 474 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 DIO3P55073 304 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 CYP2A13Q16696 494 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 GSTA3Q16772 222 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 ZNF542PQ5EBM4 170 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 CATSPEREQ5SY80 951 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 FRG2Q64ET8 278 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 PAOXQ6QHF9 649 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 SLCO4C1Q6ZQN7 724 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 RGL4Q8IZJ4 473 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 MIER2Q8N344 545 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 CADM4Q8NFZ8 388 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 SETD7Q8WTS6 366 aaKnown RBP19.86■□□□□ 0.77
TRIM4-202ENST00000354241 FRG2BQ96QU4 278 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 MENTQ9BUN1 341 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 HEBP2Q9Y5Z4 205 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 DGKBQ9Y6T7 804 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 GPX3P22352 226 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 PCDH1Q08174 1060 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 EIF2B5Q13144 721 aaKnown RBP19.86■□□□□ 0.77
TRIM4-202ENST00000354241 LCTLQ6UWM7 567 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 ABRAXAS1Q6UWZ7 409 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 LONP2Q86WA8 852 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 OR9I1Q8NGQ6 314 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 SLC5A11Q8WWX8 675 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 SH3KBP1Q96B97 665 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 RAB3IPQ96QF0 476 aaPredicted RBP19.86■□□□□ 0.77
TRIM4-202ENST00000354241 ACAT2Q9BWD1 397 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 ACPTQ9BZG2 426 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 PCED1AQ9H1Q7 454 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 TCEAL2Q9H3H9 227 aaPredicted RBP19.86■□□□□ 0.77
TRIM4-202ENST00000354241 PRM3Q9NNZ6 103 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 GPR27Q9NS67 375 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 AIG1Q9NVV5 245 aa19.86■□□□□ 0.77
TRIM4-202ENST00000354241 PRAMEF33A0A0G2JMD5 474 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 MAP3K13O43283 966 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 SLC2A4P14672 509 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 MAOBP27338 520 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 ILF3Q12906 894 aaKnown RBP eCLIP19.85■□□□□ 0.77
TRIM4-202ENST00000354241 FZD2Q14332 565 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 MAPRE2Q15555 327 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
TRIM4-202ENST00000354241 NRROSQ86YC3 692 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 PHACTR4Q8IZ21 702 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 FAM174AQ8TBP5 190 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 RTKNQ9BST9 563 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 IER2Q9BTL4 223 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 CADM1Q9BY67 442 aaKnown RBP19.85■□□□□ 0.77
TRIM4-202ENST00000354241 XKR8Q9H6D3 395 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 GPR45Q9Y5Y3 372 aa19.85■□□□□ 0.77
TRIM4-202ENST00000354241 PDGFBP01127 241 aaPredicted RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 RPL38P63173 70 aaKnown RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 EMX2Q04743 252 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 WASH2PQ6VEQ5 465 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 OR52E1Q8NGJ3 308 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms