RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SPTBN1Q01082 2364 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 CCDC163A0A0D9SF12 145 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 LRRN3E7EW58 273 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 LTFP02788 710 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 RB1P06400 928 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CSF1RP07333 972 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 FAM163BP0C2L3 166 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 COX7A2P14406 83 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NNMTP40261 264 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CRADDP78560 199 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TWF1Q12792 350 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 HNRNPA0Q13151 305 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 TMEM132DQ14C87 1099 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 BCL7AQ4VC05 210 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SYTL3Q4VX76 610 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 IRAK1BP1Q5VVH5 260 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZNF283Q8N7M2 679 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 VGLL2Q8N8G2 317 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TMEM176AQ96HP8 235 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZFP3Q96NJ6 502 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NEDD4LQ96PU5 975 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 OR2M2Q96R28 347 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZNF471Q9BX82 626 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 ABCG5Q9H222 651 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 MMP28Q9H239 520 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 LRRN3Q9H3W5 708 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 RIOX1Q9H6W3 641 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NLKQ9UBE8 527 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 RIC1Q4ADV7 1423 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SLC15A5A6NIM6 579 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 H3BUI4 141 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SCGB1D2O95969 90 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ADRB1P08588 477 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 GCAP28676 217 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 GPC1P35052 558 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 MAP2K4P45985 399 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 FNTBP49356 437 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ANXA8L1Q5VT79 327 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 APOBEC3FQ8IUX4 373 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 SLC44A5Q8NCS7 719 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 OR10A6Q8NH74 314 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TMEM80Q96HE8 168 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 GSX2Q9BZM3 304 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SDCBP2Q9H190 292 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 OPTCQ9UBM4 332 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 AXIN2Q9Y2T1 843 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NAALAD2Q9Y3Q0 740 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TP53BP1Q12888 1972 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 IFT172Q9UG01 1749 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 VNN2O95498 520 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 AP2A1O95782 977 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 HTR1EP28566 365 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 RYKP34925 604 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 MMP12P39900 470 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 BCAT1P54687 386 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 HSD17B7P56937 341 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 RPL7AP62424 266 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 EIF4HQ15056 248 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 TMEM198Q66K66 360 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 RAVER1Q8IY67 606 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 TTLQ8NG68 377 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 OR5T3Q8NGG3 340 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 UBA3Q8TBC4 463 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 HERVK_113Q902F9 699 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SLC7A6Q92536 515 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TRIM43Q96BQ3 446 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 MAPKAP1Q9BPZ7 522 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 MTIF3Q9H2K0 278 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 MAGIXQ9H6Y5 334 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CARS2Q9HA77 564 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 EMC7Q9NPA0 242 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ACP6Q9NPH0 428 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 FEM1BQ9UK73 627 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ACTL7AQ9Y615 435 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 FKBP7Q9Y680 259 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TCRBV5S4A2TA0A5A2 114 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TCRBV3S1A0A5B6 114 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 HSPA12AO43301 675 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 JCHAINP01591 159 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 PET100P0DJ07 73 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CRATP43155 626 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 EMP3P54852 163 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CDH11P55287 796 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 DSG2Q14126 1118 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 KEAP1Q14145 624 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZRANB3Q5FWF4 1079 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NIPA1Q7RTP0 329 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 FAM220AQ7Z4H9 259 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 NRARPQ7Z6K4 114 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ATCAYQ86WG3 371 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 PAQR7Q86WK9 346 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 LDHDQ86WU2 507 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZNF548Q8NEK5 533 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 SLC35B2Q8TB61 432 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 PABPC5Q96DU9 382 aaKnown RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 HPDLQ96IR7 371 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 OR4K3Q96R72 315 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TREX2Q9BQ50 279 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 MIEF1Q9NQG6 463 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms