RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MARVELD3Q96A59 401 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 LINGO1Q96FE5 620 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SLC30A3Q99726 388 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 OSBPL1AQ9BXW6 950 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 TNKS2Q9H2K2 1166 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SGK2Q9HBY8 427 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 TNFRSF12AQ9NP84 129 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 IL26Q9NPH9 171 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ACSS2Q9NR19 701 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 AASDHPPTQ9NRN7 309 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 RAD18Q9NS91 495 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SMOXQ9NWM0 555 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 IKZF3Q9UKT9 509 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ERVW-1Q9UQF0 538 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SLC27A6Q9Y2P4 619 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 COPG1Q9Y678 874 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 CDC7O00311 574 aa8□□□□□ -1.13
CD44-205ENST00000352818 AZIN1O14977 448 aa8□□□□□ -1.13
CD44-205ENST00000352818 FFAR2O15552 330 aa8□□□□□ -1.13
CD44-205ENST00000352818 EPHX1P07099 455 aa8□□□□□ -1.13
CD44-205ENST00000352818 CBSLP0DN79 551 aa8□□□□□ -1.13
CD44-205ENST00000352818 LIPCP11150 499 aa8□□□□□ -1.13
CD44-205ENST00000352818 CYP2A6P11509 494 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 HGFP14210 728 aa8□□□□□ -1.13
CD44-205ENST00000352818 POLR2EP19388 210 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 CHRM3P20309 590 aa8□□□□□ -1.13
CD44-205ENST00000352818 EEF1DP29692 281 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 GKP32189 559 aa8□□□□□ -1.13
CD44-205ENST00000352818 VIPR1P32241 457 aa8□□□□□ -1.13
CD44-205ENST00000352818 CBSP35520 551 aa8□□□□□ -1.13
CD44-205ENST00000352818 NSG1P42857 185 aa8□□□□□ -1.13
CD44-205ENST00000352818 RECQLP46063 649 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 RGS4P49798 205 aa8□□□□□ -1.13
CD44-205ENST00000352818 PKNOX1P55347 436 aa8□□□□□ -1.13
CD44-205ENST00000352818 ACTR3P61158 418 aa8□□□□□ -1.13
CD44-205ENST00000352818 CLCQ05315 142 aa8□□□□□ -1.13
CD44-205ENST00000352818 CYLC2Q14093 348 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 PTK2BQ14289 1009 aa8□□□□□ -1.13
CD44-205ENST00000352818 KPNB1Q14974 876 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 PTPRRQ15256 657 aa8□□□□□ -1.13
CD44-205ENST00000352818 PCBP2Q15366 365 aaKnown RBP eCLIP8□□□□□ -1.13
CD44-205ENST00000352818 CHRNA6Q15825 494 aa8□□□□□ -1.13
CD44-205ENST00000352818 PPP1R3AQ16821 1122 aa8□□□□□ -1.13
CD44-205ENST00000352818 TTLL9Q3SXZ7 439 aa8□□□□□ -1.13
CD44-205ENST00000352818 ACSBG2Q5FVE4 666 aa8□□□□□ -1.13
CD44-205ENST00000352818 CDKL4Q5MAI5 379 aa8□□□□□ -1.13
CD44-205ENST00000352818 MANEAQ5SRI9 462 aa8□□□□□ -1.13
CD44-205ENST00000352818 LRRC66Q68CR7 880 aa8□□□□□ -1.13
CD44-205ENST00000352818 NXNQ6DKJ4 435 aa8□□□□□ -1.13
CD44-205ENST00000352818 PTRHD1Q6GMV3 140 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 OGFOD2Q6N063 350 aa8□□□□□ -1.13
CD44-205ENST00000352818 AAGABQ6PD74 315 aa8□□□□□ -1.13
CD44-205ENST00000352818 TTC23LQ6PF05 361 aa8□□□□□ -1.13
CD44-205ENST00000352818 GDPD4Q6W3E5 623 aa8□□□□□ -1.13
CD44-205ENST00000352818 CYHR1Q6ZMK1 362 aa8□□□□□ -1.13
CD44-205ENST00000352818 DPY19L3Q6ZPD9 716 aa8□□□□□ -1.13
CD44-205ENST00000352818 RNF165Q6ZSG1 346 aa8□□□□□ -1.13
CD44-205ENST00000352818 LARP4Q71RC2 724 aaKnown RBP eCLIP8□□□□□ -1.13
CD44-205ENST00000352818 ZFAND4Q86XD8 727 aa8□□□□□ -1.13
CD44-205ENST00000352818 SNX32Q86XE0 403 aa8□□□□□ -1.13
CD44-205ENST00000352818 GPSM1Q86YR5 675 aa8□□□□□ -1.13
CD44-205ENST00000352818 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8□□□□□ -1.13
CD44-205ENST00000352818 CPNE9Q8IYJ1 553 aa8□□□□□ -1.13
CD44-205ENST00000352818 RYBPQ8N488 228 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 POU5F2Q8N7G0 328 aa8□□□□□ -1.13
CD44-205ENST00000352818 OR2A12Q8NGT7 310 aa8□□□□□ -1.13
CD44-205ENST00000352818 OR6K2Q8NGY2 324 aa8□□□□□ -1.13
CD44-205ENST00000352818 IFI44Q8TCB0 444 aa8□□□□□ -1.13
CD44-205ENST00000352818 FRS2Q8WU20 508 aa8□□□□□ -1.13
CD44-205ENST00000352818 EEF1AKMT1Q8WVE0 214 aa8□□□□□ -1.13
CD44-205ENST00000352818 C19orf60Q96EN9 201 aa8□□□□□ -1.13
CD44-205ENST00000352818 RPL10LQ96L21 214 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 MRGPRX3Q96LB0 322 aa8□□□□□ -1.13
CD44-205ENST00000352818 CATSPER2Q96P56 530 aa8□□□□□ -1.13
CD44-205ENST00000352818 LENG8Q96PV6 779 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 ZNF382Q96SR6 550 aa8□□□□□ -1.13
CD44-205ENST00000352818 CCT7Q99832 543 aa8□□□□□ -1.13
CD44-205ENST00000352818 HEPHQ9BQS7 1158 aa8□□□□□ -1.13
CD44-205ENST00000352818 THTPAQ9BU02 230 aa8□□□□□ -1.13
CD44-205ENST00000352818 ZDHHC6Q9H6R6 413 aa8□□□□□ -1.13
CD44-205ENST00000352818 ASB8Q9H765 288 aa8□□□□□ -1.13
CD44-205ENST00000352818 RDH14Q9HBH5 336 aa8□□□□□ -1.13
CD44-205ENST00000352818 SPATS2LQ9NUQ6 558 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 TMEM45AQ9NWC5 275 aa8□□□□□ -1.13
CD44-205ENST00000352818 ZDHHC3Q9NYG2 299 aa8□□□□□ -1.13
CD44-205ENST00000352818 UTP6Q9NYH9 597 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 PKD2L2Q9NZM6 624 aa8□□□□□ -1.13
CD44-205ENST00000352818 STX18Q9P2W9 335 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 GALPQ9UBC7 116 aa8□□□□□ -1.13
CD44-205ENST00000352818 CRLS1Q9UJA2 301 aa8□□□□□ -1.13
CD44-205ENST00000352818 ERRFI1Q9UJM3 462 aaPredicted RBP8□□□□□ -1.13
CD44-205ENST00000352818 PCTPQ9UKL6 214 aa8□□□□□ -1.13
CD44-205ENST00000352818 TNPO3Q9Y5L0 923 aaKnown RBP8□□□□□ -1.13
CD44-205ENST00000352818 ESPL1Q14674 2120 aa8□□□□□ -1.13
CD44-205ENST00000352818 CCDC187A0A096LP49 1063 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PRR19A6NJB7 356 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 BBIP1A8MTZ0 92 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 NPC1O15118 1278 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 UBDO15205 165 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms