RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 TRIM3O75382 744 aaPredicted RBP14.57□□□□□ -0.08
TRAF3-202ENST00000351691 ALPPP05187 535 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CYP4B1P13584 511 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 AKR1A1P14550 325 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CCR1P32246 355 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CA5AP35218 305 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.57□□□□□ -0.08
TRAF3-202ENST00000351691 TIMM50Q3ZCQ8 353 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CARD16Q5EG05 197 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 ARMCX4Q5H9R4 360 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 RGMBQ6NW40 437 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 SCIMPQ6UWF3 145 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 LDB1Q86U70 411 aaPredicted RBP14.57□□□□□ -0.08
TRAF3-202ENST00000351691 MSRB3Q8IXL7 192 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CDYL2Q8N8U2 506 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 DNASE1L2Q92874 299 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 NEDD4LQ96PU5 975 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 VPS35Q96QK1 796 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 ZIC5Q96T25 663 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 ACOX2Q99424 681 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 CACNG4Q9UBN1 327 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 DNMT3LQ9UJW3 386 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 RIMKLBQ9ULI2 386 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 SAMD4AQ9UPU9 718 aaKnown RBP14.57□□□□□ -0.08
TRAF3-202ENST00000351691 U3KQV3 271 aa14.57□□□□□ -0.08
TRAF3-202ENST00000351691 MICAL3Q7RTP6 2002 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NYNRINQ9P2P1 1898 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CASTOR2A6NHX0 329 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 PCDHGA12O60330 932 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 DPM1O60762 260 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 IL6P05231 212 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 TYMPP19971 482 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 PXNP49023 591 aaPredicted RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 TNK1Q13470 666 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SEMA3AQ14563 771 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CCL14Q16627 93 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 MAPKAPK3Q16644 382 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ESCO2Q56NI9 601 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ARMC4Q5T2S8 1044 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 FAHD1Q6P587 224 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 C19orf48Q6RUI8 117 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CTU1Q7Z7A3 348 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CCDC71Q8IV32 467 aaPredicted RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 TCAIMQ8N3R3 496 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 OR5H6Q8NGV6 325 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ZNF675Q8TD23 568 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 LPPQ93052 612 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NCLNQ969V3 563 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 HRASLS5Q96KN8 279 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 COL21A1Q96P44 957 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ZNF717Q9BY31 904 aaPredicted RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NIPAL2Q9H841 368 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 IL1RAPQ9NPH3 570 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 TOR4AQ9NXH8 423 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 A0A0U1RQS6 177 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SLC35F4A4IF30 521 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CDK2AP1O14519 115 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CTDSP2O14595 271 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 PAGE1O75459 146 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 HLA-DMAP28067 261 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 GRK5P34947 590 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 RPP38P78345 283 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 MGAT3Q09327 533 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NPRL3Q12980 569 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SUZ12Q15022 739 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 EIF4HQ15056 248 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 PCSK7Q16549 785 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NOMO2Q5JPE7 1267 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 LYPD8Q6UX82 237 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 CEP68Q76N32 757 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 RNF130Q86XS8 419 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 P3H2Q8IVL5 708 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ENTHD1Q8IYW4 607 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 OR8H2Q8N162 312 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NKAPQ8N5F7 415 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ESX1Q8N693 406 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 NETO1Q8TDF5 533 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SOCS4Q8WXH5 440 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 WDFY2Q96P53 400 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 GABARAPL3Q9BY60 117 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SIK2Q9H0K1 926 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 IKZF5Q9H5V7 419 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 KRT84Q9NSB2 600 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 SLC25A37Q9NYZ2 338 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 KLHL21Q9UJP4 597 aa14.56□□□□□ -0.08
TRAF3-202ENST00000351691 ABT1Q9ULW3 272 aaKnown RBP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRAF3-202ENST00000351691 A0A0X1KG70 313 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 LDB2O43679 373 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 OR4F21O95013 312 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 GNPDA1P46926 289 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 RGS6P49758 472 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 CREMQ03060 361 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 MAD2L1Q13257 205 aaPredicted RBP14.55□□□□□ -0.08
TRAF3-202ENST00000351691 ASAH1Q13510 395 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
TRAF3-202ENST00000351691 RNF165Q6ZSG1 346 aa14.55□□□□□ -0.08
TRAF3-202ENST00000351691 KDELC2Q7Z4H8 507 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms