RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 CROTQ9UKG9 612 aa9.45□□□□□ -0.9
MRPL55-204ENST00000348259 CNOT6Q9ULM6 557 aaKnown RBP9.45□□□□□ -0.9
MRPL55-204ENST00000348259 POLHQ9Y253 713 aa9.45□□□□□ -0.9
MRPL55-204ENST00000348259 OAS3Q9Y6K5 1087 aaKnown RBP9.45□□□□□ -0.9
MRPL55-204ENST00000348259 C2CD3Q4AC94 2353 aa9.45□□□□□ -0.9
MRPL55-204ENST00000348259 NF1P21359 2839 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 A0A0U1RQS6 177 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 C1orf232A0A0U1RR37 186 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 OR51F1A6NGY5 319 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 LILRA5A6NI73 299 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 A8MU76 341 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 G3V2L1 256 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 CCL22O00626 93 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 BUD23O43709 281 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 NDUFS3O75489 264 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 AGFG2O95081 481 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SNUPNO95149 360 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 CLDN1O95832 211 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 ESR1P03372 595 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 CYP2A6P11509 494 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 CTPS1P17812 591 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 RPS3P23396 243 aaKnown RBP eCLIP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 MC4RP32245 332 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SKIV2L2P42285 1042 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 GFERP55789 205 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TMPRSS15P98073 1019 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TIAL1Q01085 375 aaKnown RBP eCLIP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 HHEXQ03014 270 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SEMA3AQ14563 771 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 PCLAFQ15004 111 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 ACAP2Q15057 778 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 FAM83EQ2M2I3 478 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 AGAP9Q5VTM2 703 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 RAET1GQ6H3X3 334 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 ZNF549Q6P9A3 640 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SPATA21Q7Z572 469 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SNX20Q7Z614 316 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TBC1D1Q86TI0 1168 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TRIM74Q86UV6 250 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 PLD6Q8N2A8 252 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 GPATCH11Q8N954 259 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 Q8NA96 180 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 CPT1CQ8TCG5 803 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 PLEKHG4BQ96PX9 1271 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SMIM14Q96QK8 99 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SLC38A3Q99624 504 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 OLFM1Q99784 485 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 ELAC2Q9BQ52 826 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 MRPL57Q9BQC6 102 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 FAM107BQ9H098 131 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 EPB41L1Q9H4G0 881 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 UCK1Q9HA47 277 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 RAD18Q9NS91 495 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 THAP1Q9NVV9 213 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SEMA5BQ9P283 1151 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 KLHL14Q9P2G3 628 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 NFKBIL1Q9UBC1 381 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 RUVBL2Q9Y230 463 aaKnown RBP9.44□□□□□ -0.9
MRPL55-204ENST00000348259 ARL2BPQ9Y2Y0 163 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 SLC30A1Q9Y6M5 507 aa9.44□□□□□ -0.9
MRPL55-204ENST00000348259 GAPDHSO14556 408 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-204ENST00000348259 PHGDHO43175 533 aaKnown RBP9.43□□□□□ -0.9
MRPL55-204ENST00000348259 CREG1O75629 220 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 DNAJB5O75953 348 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 SRP72O76094 671 aaKnown RBP9.43□□□□□ -0.9
MRPL55-204ENST00000348259 CLDN7O95471 211 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 SERPINE1P05121 402 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 RBP1P09455 135 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 LTA4HP09960 611 aaKnown RBP9.43□□□□□ -0.9
MRPL55-204ENST00000348259 FGF5P12034 268 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 BPIP17213 487 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 BGNP21810 368 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 ALDH3A1P30838 453 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 DLSTP36957 453 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 SPAM1P38567 509 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 DCTP40126 519 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 CLCNKAP51800 687 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 CDKN2DP55273 166 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 DCDC1P59894 354 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 IRF9Q00978 393 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 OCRLQ01968 901 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 PTSQ03393 145 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 ASPHQ12797 758 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 STX3Q13277 289 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 SNAP47Q5SQN1 464 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 RBM20Q5T481 1227 aaKnown RBP9.43□□□□□ -0.9
MRPL55-204ENST00000348259 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 CGB2Q6NT52 195 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 KLC3Q6P597 504 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 DOK6Q6PKX4 331 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 ZYG11AQ6WRX3 759 aa9.43□□□□□ -0.9
MRPL55-204ENST00000348259 OTOAQ7RTW8 1153 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms