RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 DRD3P35462 400 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 LTBRP36941 435 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PSMD7P51665 324 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 THOP1P52888 689 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PSME3P61289 254 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 STX5Q13190 355 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CEACAM7Q14002 265 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RPS6KA2Q15349 733 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CCDC6Q16204 474 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 VPS26BQ4G0F5 336 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CCSMST1Q4G0I0 132 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SYTL3Q4VX76 610 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 C2orf27AQ580R0 203 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PIGGQ5H8A4 983 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 C6orf136Q5SQH8 315 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 DSG4Q86SJ6 1040 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ADGRG6Q86SQ4 1221 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RASGRP3Q8IV61 690 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 AADATQ8N5Z0 425 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PLA2G15Q8NCC3 412 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CXorf40AQ8TE69 158 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 GATAD2BQ8WXI9 593 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 GAL3ST3Q96A11 431 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 HIST1H2AHQ96KK5 128 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 HIST1H2AJQ99878 128 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 H2AFJQ9BTM1 129 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SLC25A23Q9BV35 468 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ATG10Q9H0Y0 220 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 AIG1Q9NVV5 245 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ZNHIT2Q9UHR6 403 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PCDHGA7Q9Y5G6 932 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 MYO10Q9HD67 2058 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SLC5A10A0PJK1 596 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 FAM221AA4D161 298 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ARHGEF33A8MVX0 844 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 K7EQS6 105 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 MRASO14807 208 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SLC16A5O15375 505 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SYNCRIPO60506 623 aaKnown RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 LILRB5O75023 590 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 WDR47O94967 919 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 MATN4O95460 622 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 IDO1P14902 403 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 XRCC1P18887 633 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CAPN3P20807 821 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CYP2A7P20853 494 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 GGT5P36269 586 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SLC6A12P48065 614 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PTDSS1P48651 473 aaKnown RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 TAS2R38P59533 333 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 UFM1P61960 85 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RPS26P62854 115 aaKnown RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CDKL1Q00532 357 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SP140Q13342 867 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 GSTA3Q16772 222 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PTCHD3Q3KNS1 767 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SGO1Q5FBB7 561 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CDKL4Q5MAI5 379 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NEK5Q6P3R8 708 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NEK10Q6ZWH5 1172 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ZNF765Q7L2R6 523 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 FNDC5Q8NAU1 212 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NRG4Q8WWG1 115 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PYDC1Q8WXC3 89 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM159Q96B96 161 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RIPOR3Q96MK2 946 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 FERD3LQ96RJ6 166 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NTMT1Q9BV86 223 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 TRIM54Q9BYV2 358 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SLC32A1Q9H598 525 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM165Q9HC07 324 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 RIC8BQ9NVN3 520 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 STX18Q9P2W9 335 aaKnown RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ATXN10Q9UBB4 475 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 KLQ9UEF7 1012 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 SERGEFQ9UGK8 458 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PCYT1BQ9Y5K3 369 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 CROCCQ5TZA2 2017 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 IGLON5A6NGN9 336 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 E7ENX8 843 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 QSOX1O00391 747 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 SOX1O00570 391 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-202ENST00000345734 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
ATG4A-202ENST00000345734 GSTM1P09488 218 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 LINGO3P0C6S8 592 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 EBLN1P0CF75 366 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 BDKRB1P46663 353 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 ZFP36L2P47974 494 aaKnown RBP8.97□□□□□ -0.97
ATG4A-202ENST00000345734 ERVK-8P63133 956 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 MS4A2Q01362 244 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 GSTM4Q03013 218 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 DPTQ07507 201 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 ENPP2Q13822 863 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 CST6Q15828 149 aa8.97□□□□□ -0.97
ATG4A-202ENST00000345734 ZNF658BQ4V348 819 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms