RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 MKL2Q9ULH7 1088 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 PLAGL1Q9UM63 463 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC22A14Q9Y267 594 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 LATO43561 262 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 HOXC13P31276 330 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 LRCH3Q96II8 777 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 PRKCHP24723 683 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 CLCN4P51793 760 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 FAM214AQ32MH5 1076 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 CENPIQ92674 756 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 TAPBPLQ9BX59 468 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 YBX2Q9Y2T7 364 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 SSC5DA1L4H1 1573 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 MPC1LP0DKB6 136 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 ACRV1P26436 265 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 CSNK1EP49674 416 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 TFF2Q03403 129 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 LRRC69Q6ZNQ3 347 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 ZNF761Q86XN6 746 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 ANKRD49Q8WVL7 239 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 MSANTD3Q96H12 275 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 OXSMQ9NWU1 459 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 CLN6Q9NWW5 311 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 NDUFA13Q9P0J0 144 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 MAGEB17A8MXT2 336 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 IRF9Q00978 393 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 NRG1Q02297 640 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DYNC1I2Q13409 638 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 Q6ZSR6 202 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 NPAS2Q99743 824 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 NECTIN3Q9NQS3 549 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 COL9A2Q14055 689 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DEFB133Q30KQ1 61 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC30A8Q8IWU4 369 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 GPR65Q8IYL9 337 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 ZNF781Q8N8C0 355 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 ANKRD27Q96NW4 1050 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 S100A13Q99584 98 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DUSP26Q9BV47 211 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DHRS12A0PJE2 317 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 TRIM24O15164 1050 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PRPS1L1P21108 318 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PRDX6P30041 224 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DEFA1P59665 94 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DEFA3P59666 94 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 TOP3AQ13472 1001 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 TOR1AIP1Q5JTV8 583 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 C10orf62Q5T681 223 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 C7orf57Q8NEG2 295 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 RELTQ969Z4 430 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 KIAA1191Q96A73 305 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PPM1MQ96MI6 270 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 SMAD6O43541 496 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 AGR2O95994 175 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 NCBP2P52298 156 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 RGS8P57771 180 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 DMWDQ09019 674 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 RFX4Q33E94 735 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 C8orf59Q8N0T1 100 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 CHFRQ96EP1 664 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PPM1HQ9ULR3 514 aa15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-201ENST00000344626 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 BCAT2O15382 392 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 B4GALT2O60909 372 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SMNDC1O75940 238 aaKnown RBP eCLIP15.97■□□□□ 0.151e-8■□□□□ 10.1
SMARCA4-201ENST00000344626 BTN3A2P78410 334 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ARHGAP8P85298 464 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 RTL4Q6ZR62 310 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC29A4Q7RTT9 530 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 RANBP3LQ86VV4 465 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 GFM1Q96RP9 751 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 TRIB3Q96RU7 358 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 KCNN2Q9H2S1 579 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 DHRS7Q9Y394 339 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 TGFB1P01137 390 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 CD38P28907 300 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 HOXA9P31269 272 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SPESP1Q6UW49 350 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ZDHHC14Q8IZN3 488 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SMPDL3BQ92485 455 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ABTB1Q969K4 478 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 MYADMQ96S97 322 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 YIPF3Q9GZM5 350 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 RMI1Q9H9A7 625 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 MYH4Q9Y623 1939 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SMCHD1A6NHR9 2005 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ELOVL7A1L3X0 281 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SAP18O00422 153 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 RYKP34925 604 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ERVK-8P63133 956 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 EIPR1Q53HC9 387 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 TMIGD1Q6UXZ0 262 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 WDR36Q8NI36 951 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC13A3Q8WWT9 602 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms