RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GSTM4Q03013 218 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 MAPK15Q8TD08 544 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF431Q8TF32 576 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 SMG7Q92540 1137 aaKnown RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 COMMD3Q9UBI1 195 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 KLHL18O94889 574 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OR5F1O95221 314 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 RAB36O95755 333 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 HPGDP15428 266 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ENGP17813 658 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GANABQ14697 944 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 FOXB2Q5VYV0 432 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 B3GNT9Q6UX72 402 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CFAP52Q8N1V2 620 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF614Q8N883 585 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 EXOC2Q96KP1 924 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 C20orf27Q9GZN8 174 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NEUROD4Q9HD90 331 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NFKBIL1Q9UBC1 381 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NUP50Q9UKX7 468 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 RAI2Q9Y5P3 530 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PLD2O14939 933 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AZGP1P25311 298 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CHRNA4P43681 627 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 STC1P52823 247 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 APOFQ13790 326 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DSC3Q14574 896 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AGAP7PQ5VUJ5 663 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MED27Q6P2C8 311 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 LRRC70Q7Z2Q7 622 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GALNT7Q86SF2 657 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GALNT13Q8IUC8 556 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ARNTL2Q8WYA1 636 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GOLGA2P5Q9HBQ8 144 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OLAHQ9NV23 265 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF780BQ9Y6R6 833 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CARNS1A5YM72 827 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MOXD2PA6NHM9 499 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PCP4L1A6NKN8 68 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 XYLBO75191 536 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GGT1P19440 569 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CD247P20963 164 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NPRL3Q12980 569 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KCNJ8Q15842 424 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF438Q7Z4V0 828 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PIM3Q86V86 326 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DCP2Q8IU60 420 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KCNA7Q96RP8 456 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SACM1LQ9NTJ5 587 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ABCB8Q9NUT2 735 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SPG21Q9NZD8 308 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 URADA6NGE7 173 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NME4O00746 187 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ITGA10O75578 1167 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TCEA1P23193 301 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KCNC3Q14003 757 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MEDAGQ5VYS4 303 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GDPD1Q8N9F7 314 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OR4C6Q8NH72 309 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 APOLD1Q96LR9 279 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CMTM6Q9NX76 183 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MAP4K5Q9Y4K4 846 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 A8MX80 341 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLC19A2O60779 497 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GSTM3P21266 225 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PIK3CBP42338 1070 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ST3GAL4Q11206 333 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CBLBQ13191 982 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NDUFA9Q16795 377 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GOLGA7Q7Z5G4 137 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PAPD5Q8NDF8 572 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GPR156Q8NFN8 814 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLC29A1Q99808 456 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DPAGT1Q9H3H5 408 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 FOLH1BQ9HBA9 442 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PDLIM7Q9NR12 457 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ERVK13-1Q9NX77 482 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OARD1Q9Y530 152 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OAS3Q9Y6K5 1087 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DPEP1P16444 411 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 HTR2BP41595 481 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SCNN1GP51170 649 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 INHBCP55103 352 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CYP4V2Q6ZWL3 525 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLC7A5P1Q8MH63 180 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KLHL36Q8N4N3 616 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 RHOXF1Q8NHV9 184 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TNFAIP8L1Q8WVP5 186 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KCNJ9Q92806 393 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GON7Q9BXV9 100 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MRPL9Q9BYD2 267 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZDHHC6Q9H6R6 413 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLC2A6Q9UGQ3 507 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 RIMKLBQ9ULI2 386 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ERVW-1Q9UQF0 538 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 BTAF1O14981 1849 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms