RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
TMEM248-201ENST00000341567 PHYKPLQ8IUZ5 450 aa13.19□□□□□ -0.3
TMEM248-201ENST00000341567 WDR36Q8NI36 951 aaKnown RBP13.19□□□□□ -0.3
TMEM248-201ENST00000341567 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
TMEM248-201ENST00000341567 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
TMEM248-201ENST00000341567 CCNB1IP1Q9NPC3 277 aa13.19□□□□□ -0.3
TMEM248-201ENST00000341567 OR10H3O60404 316 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ACP5P13686 325 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 FEN1P39748 380 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ARSFP54793 590 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 NFKB2Q00653 900 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 FPGSQ05932 587 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PCBP2Q15366 365 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■□□□□ 9.3
TMEM248-201ENST00000341567 VITQ6UXI7 678 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 METTL3Q86U44 580 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 KDM1BQ8NB78 822 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 DNAJB9Q9UBS3 223 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 COL4A5P29400 1685 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 FPGTO14772 594 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TGM5O43548 720 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PLOD3O60568 738 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 LEFTY1O75610 366 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 NFATC1O95644 943 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CYP11A1P05108 521 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RHOP08100 348 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 BDKRB1P46663 353 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CCT3P49368 545 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CCR4P51679 360 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ERVK-8P63133 956 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 OR4D1Q15615 310 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ATAT1Q5SQI0 421 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF678Q5SXM1 525 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 LYPLAL1Q5VWZ2 237 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 LINC01465Q8N7H1 131 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 BADQ92934 168 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 INTS7Q9NVH2 962 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 LYVE1Q9Y5Y7 322 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 UTRNP46939 3433 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 A0A1W2PP18 115 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TULP3O75386 442 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 OPN1SWP03999 348 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 NR2F1P10589 423 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PCSK6P29122 969 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 KCNAB2Q13303 367 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TRIM63Q969Q1 353 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 NUMBLQ9Y6R0 609 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 KRT87PA6NCN2 255 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PSIP1O75475 530 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CAPN15O75808 1086 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 PRNPP04156 253 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RFTN1Q14699 578 aaPredicted RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 SNAP47Q5SQN1 464 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 LILRA2Q8N149 483 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 DCAF4L2Q8NA75 395 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 NELL1Q92832 810 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 C1GALT1C1Q96EU7 318 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RTP3Q9BQQ7 232 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF221Q9UK13 617 aa13.18□□□□□ -0.3
TMEM248-201ENST00000341567 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
TMEM248-201ENST00000341567 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 A8MV72 311 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 GDI1P31150 447 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 RPS14P62263 151 aaKnown RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 IL18R1Q13478 541 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 DEF8Q6ZN54 512 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CHST14Q8NCH0 376 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 PDPRQ8NCN5 879 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM110BQ8TC76 370 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 REPS1Q96D71 796 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms