RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KDELR3O43731 214 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 IL6P05231 212 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 TCF3P15923 654 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CD247P20963 164 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 SERPINB1P30740 379 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CTSKP43235 329 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 C2orf80Q0P641 193 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 LMAN2Q12907 356 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 UGT3A2Q3SY77 523 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 FNDC3BQ53EP0 1204 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 PYCR3Q53H96 274 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CTSL3PQ5NE16 218 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CCNYL2Q5T2Q4 361 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 FAM91A1Q658Y4 838 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 AQP12AQ8IXF9 295 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 RAVER1Q8IY67 606 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 GPR65Q8IYL9 337 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 C12orf76Q8N812 135 aaPredicted RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 TTC29Q8NA56 475 aaPredicted RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 OR4A15Q8NGL6 344 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 VPS35Q96QK1 796 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 MACROD1Q9BQ69 325 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 RHNO1Q9BSD3 238 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 IKZF5Q9H5V7 419 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 ABCB9Q9NP78 766 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 ASAH2Q9NR71 780 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 OAS3Q9Y6K5 1087 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 ANK1P16157 1881 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 SLC35F4A4IF30 521 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 CATP04040 527 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 NUDT7P0C024 238 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TRAP1Q12931 704 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 TAB1Q15750 504 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 NPTX1Q15818 432 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 RGS21Q2M5E4 152 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 RFX4Q33E94 735 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 GPRC6AQ5T6X5 926 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 CPTPQ5TA50 214 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 JPH3Q8WXH2 748 aaPredicted RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 SLC39A13Q96H72 371 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 MRPL9Q9BYD2 267 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 PLGRKTQ9HBL7 147 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TRIM39Q9HCM9 518 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 IMP3Q9NV31 184 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 SRRDQ9UH36 339 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TMEM98Q9Y2Y6 226 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 Q9Y3F1 56 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 SQORQ9Y6N5 450 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 RTTNQ86VV8 2226 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 AHCTF1Q8WYP5 2266 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 LOC100130705A0A1B0GUX0 176 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 LOC285095A0A1B0GVY8 99 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 H3BM21 787 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 OR10H3O60404 316 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 EIF2S1P05198 315 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 SHMT2P34897 504 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TGFBR1P36897 503 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 FEN1P39748 380 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 ARPC4P59998 168 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 NCS1P62166 190 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 XKR4Q5GH76 650 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DEPDC1Q5TB30 811 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 PPP4R4Q6NUP7 873 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 SNX20Q7Z614 316 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DTX3Q8N9I9 347 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 KCNJ9Q92806 393 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 KCNS3Q9BQ31 491 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 MCMBPQ9BTE3 642 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 ERVK-18Q9QC07 812 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 WDR37Q9Y2I8 494 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DOCK6Q96HP0 2047 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 M0QX08 132 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 SUV39H1O43463 412 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 CSF2RAP15509 400 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 HOXB8P17481 243 aaPredicted RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 MC1RQ01726 317 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 SLC13A2Q13183 592 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 MAD2L1Q13257 205 aaPredicted RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 INAQ16352 499 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 LY6G5CQ5SRR4 150 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.01□□□□□ -1.13
HPS4-201ENST00000336873 THOC7Q6I9Y2 204 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 CHST9Q7L1S5 443 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 NLGN4XQ8N0W4 816 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 OR2AP1Q8NGE2 309 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 PHF10Q8WUB8 498 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 ZFAND2BQ8WV99 257 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 PROX1Q92786 737 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 RPL3LQ92901 407 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 SORBS1Q9BX66 1292 aaKnown RBP8.01□□□□□ -1.13
HPS4-201ENST00000336873 LHPPQ9H008 270 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DNAJC11Q9NVH1 559 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TMCO1Q9UM00 188 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 CLEC4AQ9UMR7 237 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DHRS7Q9Y394 339 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 DYRK1BQ9Y463 629 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms