RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 PPP4R1Q8TF05 950 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ANKRD49Q8WVL7 239 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 KCNE4Q8WWG9 221 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 INPP5DQ92835 1189 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 DERL2Q9GZP9 239 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TFB2MQ9H5Q4 396 aaKnown RBP9.48□□□□□ -0.89
SYN3-201ENST00000332840 RDH14Q9HBH5 336 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 PRDM8Q9NQV8 689 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ACSL6Q9UKU0 697 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ACSL5Q9ULC5 683 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ATXN7L1Q9ULK2 861 aaPredicted RBP9.48□□□□□ -0.89
SYN3-201ENST00000332840 DNAJC16Q9Y2G8 782 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 MED16Q9Y2X0 877 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 DHRS7Q9Y394 339 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 USH1CQ9Y6N9 552 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 IGLV3-16A0A075B6K0 115 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 MGAT4DA6NG13 374 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 CDRT15L2A8MXV6 281 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 NVLO15381 856 aaKnown RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 GPR39O43194 453 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 TLX3O43711 291 aaPredicted RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 DLX3O60479 287 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 SMIM24O75264 130 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 C1QL1O75973 258 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 SNUPNO95149 360 aaKnown RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 SLC35G4P0C7Q5 338 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 THRAP10827 490 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 CSTF2P33240 577 aaKnown RBP eCLIP9.47□□□□□ -0.89
SYN3-201ENST00000332840 SERPINB5P36952 375 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 RGS4P49798 205 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 RAB15P59190 212 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 IL2P60568 153 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 SF3A3Q12874 501 aaKnown RBP eCLIP9.47□□□□□ -0.89
SYN3-201ENST00000332840 IFT88Q13099 833 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 PLA2G4EQ3MJ16 856 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 ZNF648Q5T619 568 aaPredicted RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 TMEM220Q6QAJ8 160 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 USP53Q70EK8 1073 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 C11orf96Q7Z7L8 435 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 ISCA2Q86U28 154 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 OR2L2Q8NH16 312 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 STAG3L4Q8TBR4 150 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 CD200R1Q8TD46 325 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 ZFPM2Q8WW38 1151 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 KIAA1191Q96A73 305 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 PDLIM5Q96HC4 596 aaKnown RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 LINC00615Q96LM1 132 aaPredicted RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 PANX3Q96QZ0 392 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 GATA5Q9BWX5 397 aaPredicted RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 NPHS2Q9NP85 383 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 LATS2Q9NRM7 1088 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 PDP2Q9P2J9 529 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 KLHL42Q9P2K6 505 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 SLC23A2Q9UGH3 650 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 PCYT1BQ9Y5K3 369 aaPredicted RBP9.47□□□□□ -0.89
SYN3-201ENST00000332840 HEBP2Q9Y5Z4 205 aa9.47□□□□□ -0.89
SYN3-201ENST00000332840 TRBV23OR9-2A0A075B6M9 112 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 IGHV5-10-1A0A0J9YXX1 117 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 C17orf113A0A1B0GUU1 675 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 OR2AG2A6NM03 316 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CCT8L1PA6NM43 557 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 TOX3O15405 576 aaPredicted RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 ITM2AO43736 263 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 ZBTB14O43829 449 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 NPHS1O60500 1241 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 IPO13O94829 963 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 KIAA0754O94854 1291 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 UBXN7O94888 489 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 AP2A2O94973 939 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 HSPA4LO95757 839 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 EML2O95834 649 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 OR56A5P0C7T3 313 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 TPBGLP0DKB5 382 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 ATP1B2P14415 290 aaPredicted RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 RPL10P27635 214 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 NDUFS1P28331 727 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CA5AP35218 305 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 PRLHRP49683 370 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CLCN7P51798 805 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 ARFIP2P53365 341 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CTSCP53634 463 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 HNRNPH2P55795 449 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 RPA4Q13156 261 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 DSG2Q14126 1118 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 TTLL9Q3SXZ7 439 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CES4AQ5XG92 561 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 METRNLQ641Q3 311 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 CYB5D1Q6P9G0 228 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 TMEM26Q6ZUK4 368 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 WDR75Q8IWA0 830 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 SIDT2Q8NBJ9 832 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 PIWIL2Q8TC59 973 aaKnown RBP9.46□□□□□ -0.9
SYN3-201ENST00000332840 HM13Q8TCT9 377 aa9.46□□□□□ -0.9
SYN3-201ENST00000332840 C10orf82Q8WW14 230 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms