RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 NANOGQ9H9S0 305 aa17.33■□□□□ 0.36
ACTB-201ENST00000331789 SGK2Q9HBY8 427 aa17.33■□□□□ 0.36
ACTB-201ENST00000331789 LIMD1Q9UGP4 676 aa17.33■□□□□ 0.36
ACTB-201ENST00000331789 ASF1AQ9Y294 204 aa17.33■□□□□ 0.36
ACTB-201ENST00000331789 CROCCQ5TZA2 2017 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3DA0A087WVF3 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3IA0A087WXS9 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3EA0A087X179 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3KA0A087X1G2 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3FA6NER0 549 aaPredicted RBP17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3LB9A6J9 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3HP0C7X1 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 HSD17B1P14061 328 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 NPPBP16860 134 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 AMD1P17707 334 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TACR1P25103 407 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 HNF4AP41235 474 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 ADPRHP54922 357 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 PCDH1Q08174 1060 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 LRRC36Q1X8D7 754 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 FAM174BQ3ZCQ3 159 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TMEM259Q4ZIN3 620 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 CATSPEREQ5SY80 951 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3GQ6DHY5 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3CQ6IPX1 549 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 ADNP2Q6IQ32 1131 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 ZFP1Q6P2D0 407 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 UNC5DQ6UXZ4 953 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 SLCO4C1Q6ZQN7 724 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 FAM124AQ86V42 546 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 DHFR2Q86XF0 187 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 TBC1D3Q8IZP1 549 aaPredicted RBP17.32■□□□□ 0.36
ACTB-201ENST00000331789 SLC44A3Q8N4M1 653 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 OXR1Q8N573 874 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 APOLD1Q96LR9 279 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 NRTNQ99748 197 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 CLMPQ9H6B4 373 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 EGFL7Q9UHF1 273 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 CFAP20Q9Y6A4 193 aaKnown RBP17.32■□□□□ 0.36
ACTB-201ENST00000331789 KCNE2Q9Y6J6 123 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 PCM1Q15154 2024 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 MYO10Q9HD67 2058 aa17.32■□□□□ 0.36
ACTB-201ENST00000331789 H0YIV9 168 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 KMOO15229 486 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 TEAD1P28347 426 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PNLIPRP1P54315 467 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 TAP2Q03519 686 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 GRSF1Q12849 480 aaKnown RBP eCLIP17.31■□□□□ 0.366e-7■□□□□ 10
ACTB-201ENST00000331789 RPA4Q13156 261 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 SPANXN4Q5MJ08 99 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 METRNLQ641Q3 311 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 KIAA1161Q6NSJ0 714 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PQLC1Q8N2U9 271 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 C2orf73Q8N5S3 287 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 PPM1MQ96MI6 270 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 SGPP1Q9BX95 441 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 COPS7BQ9H9Q2 264 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 KCNK12Q9HB15 430 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 FZD3Q9NPG1 666 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PHPT1Q9NRX4 125 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 GPRC5BQ9NZH0 403 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 MCM8Q9UJA3 840 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 TDRKHQ9Y2W6 561 aaKnown RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 DNMT3AQ9Y6K1 912 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 NPIPB8E9PQR5 432 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 C8BP07358 591 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PRPS2P11908 318 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PCNAP12004 261 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 SDC1P18827 310 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 ATP6V1B2P21281 511 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 ATP6V1C1P21283 382 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PEX2P28328 305 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 IGFALSP35858 605 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 GSK3BP49841 420 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 CLDN8P56748 225 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 LIPEQ05469 1076 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 CSTF3Q12996 717 aaKnown RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 PWP1Q13610 501 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 TRIP10Q15642 601 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 CHRDL2Q6WN34 429 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 CHST15Q7LFX5 561 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 TMPRSS11BQ86T26 416 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 IFNEQ86WN2 208 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 HID1Q8IV36 788 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 GLB1L3Q8NCI6 653 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 SLC13A3Q8WWT9 602 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 TFGQ92734 400 aaPredicted RBP17.31■□□□□ 0.36
ACTB-201ENST00000331789 TSSK3Q96PN8 268 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 MYOCQ99972 504 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 EBPLQ9BY08 206 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 DYRK1BQ9Y463 629 aa17.31■□□□□ 0.36
ACTB-201ENST00000331789 PRSS51A0A1B0GVH4 220 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 TCRBV3S1A0A5B6 114 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 SH3BGRLO75368 114 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 NPPAP01160 153 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 DRD1P21728 446 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 RPL10P27635 214 aaKnown RBP17.3■□□□□ 0.36
ACTB-201ENST00000331789 RHDQ02161 417 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms