RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 STOX2Q9P2F5 926 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 TAC3Q9UHF0 121 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 CYP8B1Q9UNU6 501 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 PXDNQ92626 1479 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 A0A1B0GVM2 712 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 TCAF2A6NFQ2 919 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 A6NL46 340 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 H0YGN5 161 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PPEF2O14830 753 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CCL5P13501 91 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 MAGEA2P43356 314 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SLC9A4Q6AI14 798 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PIM3Q86V86 326 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 UFD1Q92890 307 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 C14orf105Q9NVL8 296 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 IRGMA1A4Y4 181 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 DIRAS1O95057 198 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 BPGMP07738 259 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PPIBP23284 216 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 VSTM1Q6UX27 236 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 HSDL2Q6YN16 418 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 LRRC69Q6ZNQ3 347 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 KCTD9Q7L273 389 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 UBQLNLQ8IYU4 475 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PNLDC1Q8NA58 520 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 RFKQ969G6 155 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 BEX2Q9BXY8 128 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CCDC86Q9H6F5 360 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 BEX1Q9HBH7 125 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CORO1CQ9ULV4 474 aaPredicted RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 MYH1P12882 1939 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 MYH4Q9Y623 1939 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ZNF860A6NHJ4 632 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 WNT7AO00755 349 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 DUSP28Q4G0W2 176 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ANKRD22Q5VYY1 191 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ORAI3Q9BRQ5 295 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ZNF395Q9H8N7 513 aaPredicted RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 UTS2RQ9UKP6 389 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 LOXHD1Q8IVV2 1947 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PREX1Q8TCU6 1659 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 MYO18AQ92614 2054 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 MRPL3P09001 348 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 MTHFD1P11586 935 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 ATP5A1P25705 553 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 OLIG2Q13516 323 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SCARB2Q14108 478 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SLC1A5Q15758 541 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ALG10Q5BKT4 473 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SRFBP1Q8NEF9 429 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 CCSER2Q9H7U1 834 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 IL21RQ9HBE5 538 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 LYARQ9NX58 379 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 CDH22Q9UJ99 828 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 PLLPQ9Y342 182 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 A6NCN8 305 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 HCAR3P49019 387 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ADAM17P78536 824 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 HMGCS1Q01581 520 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SLC35F1Q5T1Q4 408 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ABHD15Q6UXT9 468 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 BBS12Q6ZW61 710 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 OR2L2Q8NH16 312 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 NXPE2Q96DL1 559 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CLUHO75153 1309 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 VILLO15195 856 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 RNF13O43567 381 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 HOXB2P14652 356 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CRHR1P34998 444 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 LILRA4P59901 499 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 CA9Q16790 459 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ZYG11AQ6WRX3 759 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 RPS27LQ71UM5 84 aaKnown RBP10.34□□□□□ -0.75
CLN8-201ENST00000331222 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 KLRG1Q96E93 195 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
CLN8-201ENST00000331222 MROH1Q8NDA8 1641 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 CAPN14A8MX76 684 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 NRP1O14786 923 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 VIPR1P32241 457 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 MMP14P50281 582 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 PRRT3Q5FWE3 981 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 NKAPLQ5M9Q1 402 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 ARCQ7LC44 396 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 DNAJB7Q7Z6W7 309 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 LRRC52Q8N7C0 313 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLN8-201ENST00000331222 SLC22A14Q9Y267 594 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 A0A1W2PPK0 400 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 hCG_1807616A0A1W2PRN6 198 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 C4BPAP04003 597 aaKnown RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 HOXC6P09630 235 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms