RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 LIX1LQ8IVB5 337 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 TTC9BQ8N6N2 239 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 NECTIN4Q96NY8 510 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 BBS2Q9BXC9 721 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 ASPSCR1Q9BZE9 553 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 PAK1IP1Q9NWT1 392 aaPredicted RBP16.72■□□□□ 0.27
PRKCD-201ENST00000330452 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
PRKCD-201ENST00000330452 TDRD15B5MCY1 1934 aaKnown RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 LINC00587B1AMM8 73 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ST8SIA5O15466 376 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 SLC7A4O43246 635 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 LDB2O43679 373 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 SSX5O60225 188 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 SIX3O95343 332 aaPredicted RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ALDOCP09972 364 aaKnown RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 RHOQP17081 205 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 TPMTP51580 245 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 SEMA3AQ14563 771 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ZNF549Q6P9A3 640 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 KIF18BQ86Y91 864 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 SLC22A9Q8IVM8 553 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 PARP16Q8N5Y8 322 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ARRDC2Q8TBH0 407 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 LINC01599Q8WXQ3 324 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 AKAP1Q92667 903 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 NEDD4LQ96PU5 975 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ZNF300Q96RE9 604 aaPredicted RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 UPF3AQ9H1J1 476 aaKnown RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 MFSD1Q9H3U5 465 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 NUFIP1Q9UHK0 495 aaKnown RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 OSGIN1Q9UJX0 560 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ACAD8Q9UKU7 415 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 PRELID3BQ9Y3B1 194 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ARL5AQ9Y689 179 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 HSPE1-MOB4S4R3N1 261 aa16.71■□□□□ 0.27
PRKCD-201ENST00000330452 KIAA0100Q14667 2235 aaKnown RBP16.71■□□□□ 0.27
PRKCD-201ENST00000330452 ZNF99A8MXY4 864 aaPredicted RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 C9JVG2 144 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 MUSKO15146 869 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 WISP3O95389 354 aaPredicted RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 ATXN1LP0C7T5 689 aaKnown RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 SELLP14151 372 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 OR1G1P47890 313 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 NRG1Q02297 640 aaPredicted RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 BAMBIQ13145 260 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 BTBD16Q32M84 506 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 Q3ZCU0 254 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 FBXL22Q6P050 247 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 LARP4Q71RC2 724 aaKnown RBP eCLIP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 NRARPQ7Z6K4 114 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 FAM124AQ86V42 546 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 MON1AQ86VX9 555 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 CMTR2Q8IYT2 770 aaKnown RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 BLOC1S5Q8TDH9 187 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 CENPNQ96H22 339 aaPredicted RBP16.71■□□□□ 0.26
PRKCD-201ENST00000330452 LRCH3Q96II8 777 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 SPAG4Q9NPE6 437 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 GMPPBQ9Y5P6 360 aa16.71■□□□□ 0.26
PRKCD-201ENST00000330452 MEIOCA2RUB1 952 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 NRP2O60462 931 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
PRKCD-201ENST00000330452 INHAP05111 366 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TNNI3P19429 210 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 ATP6V1B2P21281 511 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 PCMT1P22061 227 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 FASP25445 335 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 SH3BP2P78314 561 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 UNC5DQ6UXZ4 953 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 EFL1Q7Z2Z2 1120 aaKnown RBP16.7■□□□□ 0.26
PRKCD-201ENST00000330452 RAB43Q86YS6 212 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 KLHL6Q8WZ60 621 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 SAV1Q9H4B6 383 aaPredicted RBP16.7■□□□□ 0.26
PRKCD-201ENST00000330452 IL1RL2Q9HB29 575 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TMEM248Q9NWD8 314 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 CHD7Q9P2D1 2997 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 BTBD3Q9Y2F9 522 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 BTN3A1O00481 513 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 OR2B3O76000 313 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 PRSS56P0CW18 603 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TYMPP19971 482 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 ACVRL1P37023 503 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 SLC7A2P52569 658 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TIAL1Q01085 375 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TNK1Q13470 666 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 XKRXQ6PP77 449 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 DHFR2Q86XF0 187 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 OR13C4Q8NGS5 318 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 FRS2Q8WU20 508 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 ST8SIA4Q92187 359 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 C19orf60Q96EN9 201 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 MYEOVQ96EZ4 313 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 SEMA3CQ99985 751 aa16.7■□□□□ 0.26
PRKCD-201ENST00000330452 TLR9Q9NR96 1032 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms