RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RFPL4BQ6ZWI9 263 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF567Q8N184 647 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZCCHC2Q9C0B9 1178 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF334Q9HCZ1 680 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 GTF2E2P29084 291 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SHMT1P34896 483 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 MNDAP41218 407 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 NR4A2P43354 598 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 LEPRP48357 1165 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 DPYSL2Q16555 572 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 HSDL1Q3SXM5 330 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 C15orf52Q6ZUT6 534 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 OR6J1Q8NGC5 347 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 CNIH3Q8TBE1 160 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 CDH10Q9Y6N8 788 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 TCAF2A6NFQ2 919 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 E7ESA3 106 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PRH1P02810 166 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ALDOAP04075 364 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ITGB6P18564 788 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 GALNT1Q10472 559 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 LRRN1Q6UXK5 716 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 METTL25Q8N6Q8 603 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 FAM46DQ8NEK8 389 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 OR10T2Q8NGX3 314 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SLC39A13Q96H72 371 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SEPT5Q99719 369 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ATP13A3Q9H7F0 1226 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 CHRAC1Q9NRG0 131 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 THUMPD1Q9NXG2 353 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHGA11Q9Y5H2 935 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SBF1O95248 1867 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SIP14410 1827 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 RFC2P35250 354 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 COL28A1Q2UY09 1125 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SLC36A3Q495N2 470 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 C1orf189Q5VU69 101 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 LINC00299Q6ZSB3 139 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ANKRD46Q86W74 232 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 DEFB106AQ8N104 65 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 MINDY1Q8N5J2 469 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 DPF3Q92784 378 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 OR4K3Q96R72 315 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 S100A13Q99584 98 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PPIL3Q9H2H8 161 aaKnown RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 FAM83DQ9H4H8 585 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 MAT2BQ9NZL9 334 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 KCPQ6ZWJ8 1503 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF536O15090 1300 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 TCRBV7S3A2A0A539 114 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF705EA8MWA4 302 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SMIM22K7EJ46 135 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 GMDSO60547 372 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PPM1BO75688 479 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 DNTTP04053 509 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 NR2F1P10589 423 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ST3GAL4Q11206 333 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PDZD9Q8IXQ8 264 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PIAS4Q8N2W9 510 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 VWA5B2Q8N398 1253 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SNAPC3Q92966 411 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF436Q9C0F3 470 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-201ENST00000322213 SCPEP1Q9HB40 452 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 FLRT1Q9NZU1 646 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 RIMS3Q9UJD0 308 aa6.9□□□□□ -1.3
SMC1A-201ENST00000322213 KRBOX1C9JBD0 128 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 KIAA0513O60268 411 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 APOC3P02656 99 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 IL1R1P14778 569 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 AGTR1P30556 359 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 OR3A3P47888 321 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 HMGCS2P54868 508 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 PGM2L1Q6PCE3 622 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 QSOX2Q6ZRP7 698 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 PGAP1Q75T13 922 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 THAP6Q8TBB0 222 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 BSNDQ8WZ55 320 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 COQ10AQ96MF6 247 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 GPR22Q99680 433 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 ACO2Q99798 780 aaKnown RBP6.9□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF70Q9UC06 446 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-201ENST00000322213 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 MAGED1Q9Y5V3 778 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-201ENST00000322213 NFASCO94856 1347 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 CADP27708 2225 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 UNCXA6NJT0 531 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 IFNA6P05013 189 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 NRG1Q02297 640 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-201ENST00000322213 EFEMP1Q12805 493 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 PRAMEF17Q5VTA0 474 aa6.9□□□□□ -1.31
SMC1A-201ENST00000322213 LRRC69Q6ZNQ3 347 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms