RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MANSC4A6NHS7 340 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 OR6C75A6NL08 312 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ELOA3DA6NLF2 546 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 INSIG1O15503 277 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MAD2L1BPQ15013 274 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ELOA3BQ3SY89 546 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 PLEKHN1Q494U1 663 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ABHD13Q7L211 337 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ELOA3Q8NG57 546 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 TEX13CA0A0J9YWL9 993 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 C9JVG2 144 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 LRCH4O75427 683 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ADRA1BP35368 520 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RPS14P62263 151 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 BTBD16Q32M84 506 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 GARNL3Q5VVW2 1013 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RABL2AQ9UBK7 228 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RABL2BQ9UNT1 228 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF878C9JN71 531 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ARL6IP5O75915 188 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 VIPP01282 170 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 GPR151Q8TDV0 419 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 FARSAQ9Y285 508 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 HES2Q9Y543 173 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 DLGAP1O14490 977 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 SLITRK5O94991 958 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RHOQP17081 205 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 HTR2AP28223 471 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF81P51508 661 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 EEFSECP57772 596 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 CAPSQ13938 189 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ISOC1Q96CN7 298 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RNF6Q9Y252 685 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 TBX10O75333 385 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 PRPS1L1P21108 318 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 CCKBRP32239 447 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RAB5BP61020 215 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MAB21L3Q8N8X9 362 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 SIDT2Q8NBJ9 832 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MTERF1Q99551 399 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 RIOK2Q9BVS4 552 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 NELFAQ9H3P2 528 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MATN3O15232 486 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC18A1P54219 525 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 NFKB2Q00653 900 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF460Q14592 562 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TRAM1Q15629 374 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 LMLNQ96KR4 655 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZIM2Q9NZV7 527 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 HLA-DPB1P04440 258 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 PBX1P40424 430 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 OXSMQ9NWU1 459 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 OR2AG2A6NM03 316 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC19A2O60779 497 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ANXA3P12429 323 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 HSD17B2P37059 387 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF101Q8IZC7 436 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 FCAMRQ8WWV6 532 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TAS2R10Q9NYW0 307 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 MEIS2O14770 477 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 PTPRAP18433 802 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 PBX3P40426 434 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 OR12D2P58182 307 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 CHAF1BQ13112 559 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 CDK10Q15131 360 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF773Q6PK81 442 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 RIPOR3Q96MK2 946 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 EBF2Q9HAK2 575 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 CACNA1CQ13936 2221 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SEC23BQ15437 767 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 CPA6Q8N4T0 437 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 RGCCQ9H4X1 137 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 VNN2O95498 520 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 GRM5P41594 1212 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 MLLT6P55198 1093 aaPredicted RBP16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TSTQ16762 297 aaKnown RBP16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 NCCRP1Q6ZVX7 275 aaPredicted RBP16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZFAND2BQ8WV99 257 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 MSANTD3Q96H12 275 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TMEM80Q96HE8 168 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 GAL3ST1Q99999 423 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 KIDINS220Q9ULH0 1771 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF705EA8MWA4 302 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms