RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 DOK1Q99704 481 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 REXO4Q9GZR2 422 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FBXO10Q9UK96 956 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CCL26Q9Y258 94 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 A0A096LPI6 279 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 EVPLLA8MZ36 301 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 INMTO95050 263 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CPNE6O95741 557 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FMO3P31513 532 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 KIR3DL1P43629 444 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 IRF8Q02556 426 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 SKIV2LQ15477 1246 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CARD16Q5EG05 197 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FRG2Q64ET8 278 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 NOXRED1Q6NXP6 359 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 C22orf39Q6P5X5 142 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 TCEAL8Q8IYN2 117 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CBARPQ8N350 705 aaPredicted RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 ZCCHC7Q8N3Z6 543 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 ASB11Q8WXH4 323 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 HDAC2Q92769 488 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 MED8Q96G25 268 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FRG2BQ96QU4 278 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CORO1BQ9BR76 489 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 SLC12A9Q9BXP2 914 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 BAG5Q9UL15 447 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 RECQL5O94762 991 aaPredicted RBP16.92■□□□□ 0.3
COL9A1-201ENST00000320755 LATS1O95835 1130 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 HPRP00739 348 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 C1SP09871 688 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 WEE1P30291 646 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 BMXP51813 675 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 CASP9P55211 416 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 C21orf59P57076 290 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 LSM3P62310 102 aaKnown RBP16.92■□□□□ 0.3
COL9A1-201ENST00000320755 RAPSNQ13702 412 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 RBM48Q5RL73 367 aaKnown RBP16.92■□□□□ 0.3
COL9A1-201ENST00000320755 CEP68Q76N32 757 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 TMEM25Q86YD3 366 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 CLECL1Q8IZS7 167 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 SH3PXD2BA1X283 911 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 NEDD8-MDP1E9PL57 170 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 FPGTO14772 594 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 SEC14L2O76054 403 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 RETP07949 1114 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 ENGP17813 658 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 AQP1P29972 269 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 LAIR2Q6ISS4 152 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 GALNT18Q6P9A2 607 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 SLC39A11Q8N1S5 342 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 MCOLN3Q8TDD5 553 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 TBC1D23Q9NUY8 699 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 DNAJC11Q9NVH1 559 aa16.92■□□□□ 0.3
COL9A1-201ENST00000320755 THG1LQ9NWX6 298 aaKnown RBP16.92■□□□□ 0.3
COL9A1-201ENST00000320755 TMEM202A6NGA9 273 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 FAM220BPB1ANY3 271 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 LEFTY2O00292 366 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CLIC1O00299 241 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 BCKDKO14874 412 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 NTRK1P04629 796 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 ATP1B2P14415 290 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-201ENST00000320755 IGFBP5P24593 272 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 NRIP1P48552 1158 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 ISL1P61371 349 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 XKR6Q5GH73 641 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-201ENST00000320755 ADNP2Q6IQ32 1131 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 Q6ZVL8 140 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CYP4Z1Q86W10 505 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 SORCS1Q8WY21 1168 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 MTG2Q9H4K7 406 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 PAK1IP1Q9NWT1 392 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-201ENST00000320755 TMEFF2Q9UIK5 374 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CBSLP0DN79 551 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 PRPS2P11908 318 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 COX7A2P14406 83 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 PTPN6P29350 595 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CBSP35520 551 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 GSSP48637 474 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 SPINT3P49223 89 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 GZMMP51124 257 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 RAD23AP54725 363 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CRTC3Q6UUV7 619 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CCDC81Q6ZN84 652 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 CALHM3Q86XJ0 350 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 LILRA3Q8N6C8 439 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-201ENST00000320755 TPD52L3Q96J77 140 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 NODALQ96S42 347 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 FUNDC2Q9BWH2 189 aa16.91■□□□□ 0.3
COL9A1-201ENST00000320755 SLC1A7O00341 560 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 DEFB103AP81534 67 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 TLE2Q04725 743 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ATP1A4Q13733 1029 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 DPY19L1Q2PZI1 675 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 SMU1Q2TAY7 513 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms