RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GOLGA8CPA6NN73 597 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 BCKDKO14874 412 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 DFNA5O60443 496 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 FTH1P02794 183 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 EIF2S1P05198 315 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 CCDC159P0C7I6 412 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 G6PDP11413 515 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 HLA-DPA1P20036 260 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 TGFBR1P36897 503 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 SEMG2Q02383 582 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 RAPSNQ13702 412 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 ACOX1Q15067 660 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 ASTLQ6HA08 431 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 EID3Q8N140 333 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 OR10A6Q8NH74 314 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 PHF10Q8WUB8 498 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 BCL7BQ9BQE9 202 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 ASPSCR1Q9BZE9 553 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 THG1LQ9NWX6 298 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 SLCO3A1Q9UIG8 710 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 FBXO10Q9UK96 956 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 PCTPQ9UKL6 214 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 PNMA8BQ9ULN7 279 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 PCDHB9Q9Y5E1 797 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 A8MX80 341 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 KATNA1O75449 491 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 PRKD3O94806 890 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 FGF1P05230 155 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 CTPS1P17812 591 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 CDKN1CP49918 316 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 SHHQ15465 462 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 TXNDC11Q6PKC3 985 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 Q6ZSR9 355 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 AKAP14Q86UN6 197 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 FAM217AQ8IXS0 508 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 OR4K2Q8NGD2 314 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 CAPSLQ8WWF8 208 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 FAM162AQ96A26 154 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 YIPF6Q96EC8 236 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF300Q96RE9 604 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 THUMPD3Q9BV44 507 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 APOL5Q9BWW9 433 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 POPDC3Q9HBV1 291 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 VAPAQ9P0L0 249 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 BTN3A1O00481 513 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 PRMT5O14744 637 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 GPR39O43194 453 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 HLA-FP30511 346 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 FMO4P31512 558 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 DCTP40126 519 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 PWP1Q13610 501 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 NPTX1Q15818 432 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 GPRIN3Q6ZVF9 776 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 TBCDQ9BTW9 1192 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 DSN1Q9H410 356 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 ACTL8Q9H568 366 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 CATSPERZQ9NTU4 200 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 ASB1Q9Y576 335 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 PCDHGB1Q9Y5G3 927 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 PCDHGA10Q9Y5H3 936 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 NOX1Q9Y5S8 564 aa16.75■□□□□ 0.27
SCAMP4-201ENST00000316097 LATS1O95835 1130 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 ALPIP09923 528 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 HOXB8P17481 243 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 CD6P30203 668 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 WEE1P30291 646 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 PPP5CP53041 499 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 GLT6D1Q7Z4J2 308 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 GALNT5Q7Z7M9 940 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 RPL3LQ92901 407 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 FUBP1Q96AE4 644 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 DERL2Q9GZP9 239 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 SLIRPQ9GZT3 109 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 RETREG1Q9H6L5 497 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 GORASP2Q9H8Y8 452 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 SYTL2Q9HCH5 934 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 TDP1Q9NUW8 608 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 EIF2B4Q9UI10 523 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 ORC6Q9Y5N6 252 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 ANKRD66B4E2M5 251 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 MITFO75030 526 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 MLYCDO95822 493 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 FADS2O95864 444 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 EPOP01588 193 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 PFKLP17858 780 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 NR4A2P43354 598 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 RAD51Q06609 339 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 NCEH1Q6PIU2 408 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 CYP20A1Q6UW02 462 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 PRR23BQ6ZRT6 265 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 DCP2Q8IU60 420 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 CLIP4Q8N3C7 705 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 ARL10Q8N8L6 244 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 OR52B6Q8NGF0 335 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms