RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RUNX1T1Q06455 604 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CRYZQ08257 329 aaKnown RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PTK6Q13882 451 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 TUBB2AQ13885 445 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 APOBEC3HQ6NTF7 200 aaKnown RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CDC42EP5Q6NZY7 148 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ADCK2Q7Z695 626 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 GPR180Q86V85 440 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CEP57L1Q8IYX8 460 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 BLIDQ8IZY5 108 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SLC5A8Q8N695 610 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CNNM3Q8NE01 707 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SPATA22Q8NHS9 363 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CORO2AQ92828 525 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SPAG5Q96R06 1193 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 TUBB2BQ9BVA1 445 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FNDC11Q9BVV2 318 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SPZ1Q9BXG8 430 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 C6orf50Q9HD87 102 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MYNNQ9NPC7 610 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FZD10Q9ULW2 581 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 DLEC1Q9Y238 1755 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ASTN2O75129 1339 aaPredicted RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 LTBP1Q14766 1721 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TTC3P53804 2025 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PPIP5K2O43314 1243 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ACSL3O95573 720 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 FAM58BPP0C7Q3 252 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TGFB3P10600 412 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 RFX2P48378 723 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 NOVP48745 357 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 CLCNKAP51800 687 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 BMXP51813 675 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 GABPAQ06546 454 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TRAF3Q13114 568 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 LBHQ53QV2 105 aaPredicted RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ASPRV1Q53RT3 343 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 RAB6CQ53S08 254 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PLA2G4FQ68DD2 849 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SPATA19Q7Z5L4 167 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 LUZP1Q86V48 1076 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 FAM114A1Q8IWE2 563 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SIX6OS1Q8N1H7 587 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PGBD5Q8N414 524 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SMRP1Q8NCR6 262 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PIBF1Q8WXW3 757 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 FAM162AQ96A26 154 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SPSB1Q96BD6 273 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ARSGQ96EG1 525 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 FAM81BQ96LP2 452 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 BPIFA3Q9BQP9 254 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 IDI2Q9BXS1 227 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 RAB6CQ9H0N0 254 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ARGLU1Q9NWB6 273 aaPredicted RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 DDX43Q9NXZ2 648 aaKnown RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 BARHL2Q9NY43 387 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TMOD2Q9NZR1 351 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 RCC2Q9P258 522 aaKnown RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 CLIP2Q9UDT6 1046 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 KCNS2Q9ULS6 477 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TNS1Q9HBL0 1735 aaKnown RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 NAV1Q8NEY1 1877 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ZNF541Q9H0D2 1346 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 OR2M5A3KFT3 312 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SMCO2A6NFE2 343 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 LAD1O00515 517 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 MPHOSPH10O00566 681 aaKnown RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 MEIS2O14770 477 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ASAP2O43150 1006 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 GOSR1O95249 250 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 SMC2O95347 1197 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 GCNT3O95395 438 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 GBAP04062 536 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TCF4P15884 667 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ATP5DP30049 168 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 KCNJ1P48048 391 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 AMTP48728 403 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 NAPAP54920 295 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ISL1P61371 349 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 CDK3Q00526 305 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 YWHAHQ04917 246 aaPredicted RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 TCP10Q12799 353 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PRKAA1Q13131 559 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 NHSL2Q5HYW2 709 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ODF3L1Q8IXM7 274 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 GCSAMQ8N6F7 178 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 OR52I2Q8NH67 350 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 MGARPQ8TDB4 240 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 WFIKKN2Q8TEU8 576 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ZG16BQ96DA0 208 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 OTUB1Q96FW1 271 aaPredicted RBP3.88□□□□□ -1.79
SMCO3-201ENST00000316048 C3orf30Q96M34 536 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 MUS81Q96NY9 551 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 ZMYND12Q9H0C1 365 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 COPS7BQ9H9Q2 264 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms