RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 BTRCQ9Y297 605 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 A0A0J9YVX5 310 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 A0A0J9YY10 115 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 F8W8V4 182 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 NKX2-8O15522 239 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ZBTB14O43829 449 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 SCRG1O75711 98 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 FURINP09958 794 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 MPC1LP0DKB6 136 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ERGP11308 486 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 GDF5P43026 501 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 MEF2AQ02078 507 aaPredicted RBP11.58□□□□□ -0.56
SCFD1-201ENST00000311943 USP10Q14694 798 aaKnown RBP11.58□□□□□ -0.56
SCFD1-201ENST00000311943 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 CYP2A13Q16696 494 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 CEACAM20Q6UY09 585 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 SLC26A11Q86WA9 606 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 IL22RA1Q8N6P7 574 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF655Q8N720 491 aaPredicted RBP11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.58□□□□□ -0.56
SCFD1-201ENST00000311943 PTERQ96BW5 349 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 CD180Q99467 661 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 MESP1Q9BRJ9 268 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 GPAMQ9HCL2 828 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 PDE7BQ9NP56 450 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF358Q9NW07 568 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 RARRES3Q9UL19 164 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ASB1Q9Y576 335 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 BSNQ9UPA5 3926 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 PCM1Q15154 2024 aa11.58□□□□□ -0.56
SCFD1-201ENST00000311943 ESPNB1AK53 854 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 MASP2O00187 686 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 FFAR3O14843 346 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 GPR42O15529 346 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF749O43361 778 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CATP04040 527 aaKnown RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TUBB4AP04350 444 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 ATP5DP30049 168 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 GP5P40197 560 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 IL2P60568 153 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TBPL1P62380 186 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TUBB4BP68371 445 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 KIR2DS3Q14952 304 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 PPP1R3AQ16821 1122 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 FBXO42Q6P3S6 717 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 FIGLAQ6QHK4 219 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 LRRC69Q6ZNQ3 347 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 GALNT7Q86SF2 657 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TMEM126BQ8IUX1 230 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 MYO1HQ8N1T3 1032 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 DNAJC22Q8N4W6 341 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 MED8Q96G25 268 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 OR4K3Q96R72 315 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 GPR22Q99680 433 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 DPH7Q9BTV6 452 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 ASPSCR1Q9BZE9 553 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 SPNS1Q9H2V7 528 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 ANKZF1Q9H8Y5 726 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 INTS7Q9NVH2 962 aaKnown RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 ACSL6Q9UKU0 697 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CCDC88CQ9P219 2028 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 IGSF10Q6WRI0 2623 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 FEZF1A0PJY2 475 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 POC1B-GALNT4F8VUJ3 575 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 H7BY64 318 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CCDC166P0CW27 439 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CBSLP0DN79 551 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 GCAP28676 217 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CBSP35520 551 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 SKIV2L2P42285 1042 aaKnown RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 NAE1Q13564 534 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CSHL1Q14406 222 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 OR4D1Q15615 310 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 PCSK4Q6UW60 755 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 NLGN4XQ8N0W4 816 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 NLGN4YQ8NFZ3 816 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 EXT2Q93063 718 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CCNL2Q96S94 520 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 SLC12A9Q9BXP2 914 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 TMEM184BQ9Y519 407 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-201ENST00000311943 COMMD10Q9Y6G5 202 aa11.57□□□□□ -0.56
SCFD1-201ENST00000311943 PCSK5Q92824 1860 aa11.56□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF500O60304 480 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-201ENST00000311943 RPN2P04844 631 aa11.56□□□□□ -0.56
SCFD1-201ENST00000311943 SLC35E2BP0CK96 405 aa11.56□□□□□ -0.56
SCFD1-201ENST00000311943 PRKAR1AP10644 381 aa11.56□□□□□ -0.56
SCFD1-201ENST00000311943 ENO3P13929 434 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-201ENST00000311943 MAP4P27816 1152 aaKnown RBP11.56□□□□□ -0.56
SCFD1-201ENST00000311943 ATRXP46100 2492 aa11.56□□□□□ -0.56
SCFD1-201ENST00000311943 RAB15P59190 212 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms