RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 OR2A25A4D2G3 310 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 PIAS1O75925 651 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 STK17BO94768 372 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 RHOXF2BP0C7M4 288 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 HRH2P25021 359 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 CRABP2P29373 138 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 GRIA3P42263 894 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 GCGRP47871 477 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 SLC12A2P55011 1212 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 RAB10P61026 200 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 ATP6V0D1P61421 351 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 FOXM1Q08050 763 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 FASTKQ14296 549 aaKnown RBP17.14■□□□□ 0.33
CCS-201ENST00000310190 KCNAB1Q14722 419 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 SF1Q15637 639 aaKnown RBP17.14■□□□□ 0.33
CCS-201ENST00000310190 FCRL6Q6DN72 434 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 FIGLAQ6QHK4 219 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 ZFAND4Q86XD8 727 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 KLHDC8AQ8IYD2 350 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 ESX1Q8N693 406 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 ANKRD49Q8WVL7 239 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 ATL1Q8WXF7 558 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 FBXL8Q96CD0 374 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 RHOXF2Q9BQY4 288 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 TRIM54Q9BYV2 358 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 FAM60AQ9NP50 221 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 SOHLH2Q9NX45 425 aa17.14■□□□□ 0.33
CCS-201ENST00000310190 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 CCNDBP1O95273 360 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 RECKO95980 971 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 HIST1H2AGP0C0S8 130 aaPredicted RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 PVRP15151 417 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 HIST1H2ADP20671 130 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 MAGP20916 626 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 CNTFP26441 200 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 USP10Q14694 798 aaKnown RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 PHKG1Q16816 387 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 CRTC2Q53ET0 693 aaPredicted RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 ZC3H12BQ5HYM0 836 aaKnown RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 KIAA1614Q5VZ46 1190 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 ZNF425Q6IV72 752 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 FBXO38Q6PIJ6 1188 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 TIPARPQ7Z3E1 657 aaKnown RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 ADAMTSL2Q86TH1 951 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 NLGN4XQ8N0W4 816 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 NLGN4YQ8NFZ3 816 aaPredicted RBP17.13■□□□□ 0.33
CCS-201ENST00000310190 OR56A3Q8NH54 315 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 HIST1H2AHQ96KK5 128 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 HIST1H2AJQ99878 128 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 CTRCQ99895 268 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 H2AFJQ9BTM1 129 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 DHRS4Q9BTZ2 278 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 SERTAD3Q9UJW9 196 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 OARD1Q9Y530 152 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 AP1M2Q9Y6Q5 423 aa17.13■□□□□ 0.33
CCS-201ENST00000310190 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 KRT87PA6NCN2 255 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 RAD1O60671 282 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 SRPX2O60687 465 aaPredicted RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 HBQ1P09105 142 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 SLC35E2BP0CK96 405 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 CMPK1P30085 196 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 MAGEA12P43365 314 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 HNMTP50135 292 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 SERPINB9P50453 376 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 ATP1A2P50993 1020 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 ITGA1P56199 1179 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 GPR19Q15760 415 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 ZXDCQ2QGD7 858 aaPredicted RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 YOD1Q5VVQ6 348 aaPredicted RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 ICE2Q659A1 982 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 AGTRAPQ6RW13 159 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 TRIM73Q86UV7 250 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 SPNS2Q8IVW8 549 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 DPH2Q9BQC3 489 aaPredicted RBP17.12■□□□□ 0.33
CCS-201ENST00000310190 SARGQ9BW04 601 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 ULBP3Q9BZM4 244 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 IKZF3Q9UKT9 509 aa17.12■□□□□ 0.33
CCS-201ENST00000310190 IGKV1-8A0A0C4DH67 115 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 FITM1A5D6W6 292 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 KLK10O43240 276 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 RIPK2O43353 540 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 CPNE3O75131 537 aaKnown RBP17.11■□□□□ 0.33
CCS-201ENST00000310190 FAM155BO75949 473 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 TIAF1O95411 115 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 ACSL3O95573 720 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 ONECUT2O95948 504 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
CCS-201ENST00000310190 RORAP35398 523 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 GGT5P36269 586 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 STAT5AP42229 794 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 PGGT1BP53609 377 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 EMP3P54852 163 aa17.11■□□□□ 0.33
CCS-201ENST00000310190 EFTUD2Q15029 972 aaKnown RBP eCLIP17.11■□□□□ 0.333e-8■■■□□ 15.6
CCS-201ENST00000310190 TCTE1Q5JU00 501 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms