RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ZDHHC18Q9NUE0 388 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 ATAD3AQ9NVI7 634 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 TOR4AQ9NXH8 423 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 SAMD15Q9P1V8 674 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 FNDC3AQ9Y2H6 1198 aaKnown RBP8.05□□□□□ -1.12
CHD6-201ENST00000309279 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
CHD6-201ENST00000309279 TEX264Q9Y6I9 313 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 OAS3Q9Y6K5 1087 aaKnown RBP8.05□□□□□ -1.12
CHD6-201ENST00000309279 SPEGQ15772 3267 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 ZFC3H1O60293 1989 aaKnown RBP8.05□□□□□ -1.12
CHD6-201ENST00000309279 ARHGEF17Q96PE2 2063 aaPredicted RBP8.05□□□□□ -1.12
CHD6-201ENST00000309279 PCNX2A6NKB5 2137 aa8.05□□□□□ -1.12
CHD6-201ENST00000309279 IGLV3-16A0A075B6K0 115 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ZCWPW2A0A1B0GU75 182 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PMS2P1A4D2B8 440 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 CHUKO15111 745 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 INPP4BO15327 924 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.123e-8■□□□□ 10.2
CHD6-201ENST00000309279 VEGFDO43915 354 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 NUAK1O60285 661 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 TTC4O95801 387 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 GOT2P00505 430 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 GSNP06396 782 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 IVLP07476 585 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 UBL4AP11441 157 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ITGALP20701 1170 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 FOXN2P32314 431 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 BLKP51451 505 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ATXN3P54252 364 aaPredicted RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 HNRNPKP61978 463 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHD6-201ENST00000309279 TUBB4BP68371 445 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 CACNG1Q06432 222 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 TMEM115Q12893 351 aaPredicted RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 CBX3Q13185 183 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 KCNAB2Q13303 367 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 RIPK1Q13546 671 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 TOR1AIP1Q5JTV8 583 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 LDLRAP1Q5SW96 308 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PRAMEF14Q5SWL7 426 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 GPRC6AQ5T6X5 926 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 KCTD16Q68DU8 428 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 KIAA0930Q6ICG6 404 aaPredicted RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 CASC4Q6P4E1 433 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PAPD4Q6PIY7 484 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 SLC22A25Q6T423 547 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 FGD2Q7Z6J4 655 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ADGRG6Q86SQ4 1221 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 GLRX5Q86SX6 157 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 STK32CQ86UX6 486 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 COMTD1Q86VU5 262 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 IGDCC3Q8IVU1 814 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PIANPQ8IYJ0 282 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 NXPE1Q8N323 547 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ATG16L2Q8NAA4 619 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 OR4L1Q8NH43 312 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 SAP25Q8TEE9 199 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 OR1E3Q8WZA6 343 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ULK4Q96C45 1275 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 STAMBPL1Q96FJ0 436 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 AHCYL2Q96HN2 611 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 FCRL3Q96P31 734 aaPredicted RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 CDC6Q99741 560 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 WDR83Q9BRX9 315 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 EDEM2Q9BV94 578 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 GTPBP2Q9BX10 602 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 MVB12BQ9H7P6 319 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 ZMAT3Q9HA38 289 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 EPB41L5Q9HCM4 733 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 TMEM9BQ9NQ34 198 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 FAM114A2Q9NRY5 505 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 DNAJC28Q9NX36 388 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 KIF17Q9P2E2 1029 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 KLQ9UEF7 1012 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 FAM169AQ9Y6X4 670 aa8.04□□□□□ -1.12
CHD6-201ENST00000309279 GOLGA4Q13439 2230 aaKnown RBP8.04□□□□□ -1.12
CHD6-201ENST00000309279 TRBV23-1A0A0A0MS06 115 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 PRSS38A1L453 326 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 OR51F1A6NGY5 319 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 H0YAE9 185 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 NDUFS8O00217 210 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 ST8SIA5O15466 376 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 FFAR2O15552 330 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 GDF9O60383 454 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 ULK1O75385 1050 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 BANF1O75531 89 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 ECDO95905 644 aaPredicted RBP8.03□□□□□ -1.12
CHD6-201ENST00000309279 TNFP01375 233 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 ENO2P09104 434 aaPredicted RBP8.03□□□□□ -1.12
CHD6-201ENST00000309279 ZNF8P17098 575 aaPredicted RBP8.03□□□□□ -1.12
CHD6-201ENST00000309279 JUNDP17535 347 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 PGAM1P18669 254 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 PRKACBP22694 351 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms