RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 MICU2Q8IYU8 434 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CACNA2D3Q8IZS8 1091 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CHST14Q8NCH0 376 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MCUQ8NE86 351 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR10A7Q8NGE5 316 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 STAG3L4Q8TBR4 150 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MCOLN3Q8TDD5 553 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC7A3Q8WY07 619 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ERGIC1Q969X5 290 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IFT43Q96FT9 208 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CABS1Q96KC9 395 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ATP6V0BQ99437 205 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CPNE1Q99829 537 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LINC00467Q9BRT7 94 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 AARSD1Q9BTE6 412 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 THUMPD3Q9BV44 507 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 KIFC1Q9BW19 673 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ADGRE3Q9BY15 652 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RACGAP1Q9H0H5 632 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 POLR3FQ9H1D9 316 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 PKD2L2Q9NZM6 624 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LIMA1Q9UHB6 759 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC12A6Q9UHW9 1150 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHGB4Q9UN71 923 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 EMC9Q9Y3B6 208 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHGB5Q9Y5G0 923 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SENP3-EIF4A1A0A087X0R7 540 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 A0A0U1RQJ8 604 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GOLGA6L7A0A1B0GV03 622 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NEURL1BA8MQ27 555 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 C1orf196B1AJZ1 125 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RNASET2O00584 256 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC16A3O15427 465 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC22A3O75751 556 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CDKL5O76039 1030 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ALDH1A2O94788 518 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IGHEP01854 428 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DPEP1P16444 411 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PRKCHP24723 683 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 STAT2P52630 851 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 THOP1P52888 689 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GSTO1P78417 241 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF200P98182 395 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FOXM1Q08050 763 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PMS2P3Q13401 168 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DDX39BQ13838 428 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CLEC16AQ2KHT3 1053 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CLEC12AQ5QGZ9 265 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FNBP1LQ5T0N5 605 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RNF43Q68DV7 783 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SPOPLQ6IQ16 392 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CYHR1Q6ZMK1 362 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SV2AQ7L0J3 742 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BZW1Q7L1Q6 419 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 DHX32Q7L7V1 743 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 LONP2Q86WA8 852 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BOD1L2Q8IYS8 172 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CENPLQ8N0S6 344 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 TMEM199Q8N511 208 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 WDTC1Q8N5D0 677 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FBXL8Q96CD0 374 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 R3HDM4Q96D70 268 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZSWIM3Q96MP5 696 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TEAD3Q99594 435 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KLF6Q99612 283 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 APOL6Q9BWW8 343 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 AP1M1Q9BXS5 423 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RSPO3Q9BXY4 272 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FUT8Q9BYC5 575 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KCND1Q9NSA2 647 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHGB2Q9Y5G2 931 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHA10Q9Y5I2 948 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CORINQ9Y5Q5 1042 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SPACA6W5XKT8 324 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ATRNO75882 1429 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 A0A088AWK7 358 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FAM220BPB1ANY3 271 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 H3BSA7 217 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MAN2B1O00754 1011 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PHF1O43189 567 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 NARSO43776 548 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 HYAL3O43820 417 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 KIAA0513O60268 411 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CSO75390 466 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SEC31AO94979 1220 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ANKRD34CP0C6C1 535 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZSCAN22P10073 491 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 VPREB1P12018 145 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FGF5P12034 268 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FGFR3P22607 806 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCSK1P29120 753 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FCGR2CP31995 323 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 VIPR1P32241 457 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KCNJ6P48051 423 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FMO5P49326 533 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PSEN2P49810 448 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ANXA11P50995 505 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ITGA1P56199 1179 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NOMO3P69849 1222 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms