RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FXYD1O00168 92 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 TRIM38O00635 465 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 CFLARO15519 480 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 EEDO75530 441 aaKnown RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 RSL1D1O76021 490 aaKnown RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 G6PDP11413 515 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SLC2A4P14672 509 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 CD22P20273 847 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 ME2P23368 584 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 JAK1P23458 1154 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 IL12AP29459 219 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 HALP42357 657 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 CASP2P42575 452 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 POLR2JP52435 117 aaKnown RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 IRF8Q02556 426 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 FOXM1Q08050 763 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 CCINQ13939 588 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 KIAA0040Q15053 153 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 IMPG1Q17R60 797 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SLC44A4Q53GD3 710 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 EOGTQ5NDL2 527 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 FRG2Q64ET8 278 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 GRHL2Q6ISB3 625 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 PRMT9Q6P2P2 845 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 LRRC56Q8IYG6 542 aaPredicted RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SELENOMQ8WWX9 145 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 KLK6Q92876 244 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 MRGPRX1Q96LB2 322 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 FRG2BQ96QU4 278 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SGPP1Q9BX95 441 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 OSBPL6Q9BZF3 934 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 ELOVL6Q9H5J4 265 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 RMI1Q9H9A7 625 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 SPAG4Q9NPE6 437 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 C1orf109Q9NX04 203 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.57
TRIM40-205ENST00000307859 OR1A2Q9Y585 309 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 PLXND1Q9Y4D7 1925 aa11.52□□□□□ -0.57
TRIM40-205ENST00000307859 E7EQ34 232 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 IFRD1O00458 451 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CLGNO14967 610 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 ACPPP15309 386 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 XRCC1P18887 633 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 GCKP35557 465 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 HNF4AP41235 474 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 TBPL1P62380 186 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 PPP2CBP62714 309 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 PPP2CAP67775 309 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 SFSWAPQ12872 951 aaKnown RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 PRKG2Q13237 762 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 TLR1Q15399 786 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 SGO1Q5FBB7 561 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CAPN13Q6MZZ7 669 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 TMEM92Q6UXU6 159 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 DCUN1D3Q8IWE4 304 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 KIAA2013Q8IYS2 634 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 PPFIBP2Q8ND30 876 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 RPLP0P6Q8NHW5 317 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 WDR20Q8TBZ3 569 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 WDR34Q96EX3 536 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CMTM7Q96FZ5 175 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 MED8Q96G25 268 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 HOPXQ9BPY8 73 aaPredicted RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 TIMM29Q9BSF4 260 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 EBF2Q9HAK2 575 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 SLC2A4RGQ9NR83 387 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 ABCD2Q9UBJ2 740 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 SUCOQ9UBS9 1254 aaKnown RBP11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CIDEBQ9UHD4 219 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 MMP17Q9ULZ9 603 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 NCKAP1Q9Y2A7 1128 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 SLC17A4Q9Y2C5 497 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CHD8Q9HCK8 2581 aa11.51□□□□□ -0.57
TRIM40-205ENST00000307859 CCDC154A6NI56 674 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 H0YIV9 168 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 ACOT8O14734 319 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 NARSO43776 548 aaKnown RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 ASGR2P07307 311 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 ERGP11308 486 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 PCSK2P16519 638 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 NDUFV2P19404 249 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SDHBP21912 280 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SLC34A1Q06495 639 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 CSTF3Q12996 717 aaKnown RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 DOC2AQ14183 400 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 USP39Q53GS9 565 aaKnown RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 XKR6Q5GH73 641 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SAMD4BQ5PRF9 694 aaKnown RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 LAYNQ6UX15 382 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SLCO4C1Q6ZQN7 724 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SYTL1Q8IYJ3 562 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 DENND6BQ8NEG7 585 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 FAM3CQ92520 227 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms