RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF20P17024 532 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 MERTKQ12866 999 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CRB2Q5IJ48 1285 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CERS5Q8N5B7 392 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 OR10G2Q8NGC3 310 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CENPNQ96H22 339 aaPredicted RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 ZSWIM3Q96MP5 696 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 GATA5Q9BWX5 397 aaPredicted RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 TMEM134Q9H6X4 195 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 AKTIPQ9H8T0 292 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 AKAP7Q9P0M2 348 aaPredicted RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 MYBPHLA2RUH7 354 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 PPEF2O14830 753 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 STK16O75716 305 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 TGFB3P10600 412 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 SOX2P48431 317 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 AGTR2P50052 363 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CAPZA1P52907 286 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 C1QTNF8P60827 252 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 TNFAIP8L3Q5GJ75 292 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 RAB11FIP2Q7L804 512 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 PCDH19Q8TAB3 1148 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 RNF32Q9H0A6 362 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ZNF451Q9Y4E5 1061 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 AGLP35573 1532 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 H3BNH8 94 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ORC5O43913 435 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 TBX10O75333 385 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CABYRO75952 493 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ELP6Q0PNE2 266 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 FCRLBQ6BAA4 426 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 SH3YL1Q96HL8 342 aaPredicted RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 ERVK13-1Q9NX77 482 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 KCTD3Q9Y597 815 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 C11orf98E9PRG8 122 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.434e-7■■■■■ 29.1
USP38-201ENST00000307017 PRKCIP41743 596 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CLCN7P51798 805 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 NNATQ16517 81 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 TXNDC8Q6A555 127 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ADNP2Q6IQ32 1131 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ZNF517Q6ZMY9 492 aaPredicted RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 PEX13Q92968 403 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CD8B2A6NJW9 211 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CD8BP10966 210 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ATF6P18850 670 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 NPR2P20594 1047 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 TACR2P21452 398 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 SHFQ7M4L6 423 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 GALNT12Q8IXK2 581 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 SPATA31A5Q5VU36 1347 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SPATA31A7Q8IWB4 1347 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 JCADQ9P266 1359 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 CDC7O00311 574 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SFTPBP07988 381 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 CSKP41240 450 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 PDCD4Q53EL6 469 aaKnown RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 PRDM8Q9NQV8 689 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 KIAA1522Q9P206 1035 aaPredicted RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 IL20RAQ9UHF4 553 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 LOC100130705A0A1B0GUX0 176 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 PLD2O14939 933 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 TGFBIQ15582 683 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 ZNF676Q8N7Q3 588 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 C1orf216Q8TAB5 229 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 COL21A1Q96P44 957 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SLC6A7Q99884 636 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 CCDC86Q9H6F5 360 aaKnown RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 CCNB1IP1Q9NPC3 277 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 A0A0U1RQK1 487 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 HNRNPA0Q13151 305 aaKnown RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 ZNF311Q5JNZ3 666 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 IGFN1Q86VF2 1251 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SLC7A5P1Q8MH63 180 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 DCSTAMPQ9H295 470 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 RDH8Q9NYR8 311 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 A0A0J9YVX5 310 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 GPR25O00155 361 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 ALPPP05187 535 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 FGF1P05230 155 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 ITGA5P08648 1049 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 CLCN4P51793 760 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 CACNG1Q06432 222 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 XKR4Q5GH76 650 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms