RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 HIC2Q96JB3 615 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 FCRL1Q96LA6 429 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SERHLQ9NQF3 203 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SLC23A2Q9UGH3 650 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 PCDHGB4Q9UN71 923 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 PCDHGB5Q9Y5G0 923 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 DOCK9Q9BZ29 2069 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SMNDC1O75940 238 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP47-201ENST00000305481 ETHE1O95571 254 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 IL6P05231 212 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 NPPBP16860 134 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 HTR1EP28566 365 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 GALK1P51570 392 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 RPS14P62263 151 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 ADAM15Q13444 863 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 E2F2Q14209 437 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 SF1Q15637 639 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 CST6Q15828 149 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 WSCD2Q2TBF2 565 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ITPRIPL2Q3MIP1 535 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 MTX3Q5HYI7 312 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ATAT1Q5SQI0 421 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 IRAK1BP1Q5VVH5 260 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 PNCKQ6P2M8 343 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 TMEM154Q6P9G4 183 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ADAMTSL4Q6UY14 1074 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 SLCO4C1Q6ZQN7 724 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 GALNT13Q8IUC8 556 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 CHPFQ8IZ52 775 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 GLB1L3Q8NCI6 653 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 ICA1LQ8NDH6 482 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 OR2L2Q8NH16 312 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ATL1Q8WXF7 558 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ZNF583Q96ND8 569 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 BTBD9Q96Q07 612 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 NR1H4Q96RI1 486 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 MTERF1Q99551 399 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 ZCCHC2Q9C0B9 1178 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 RPF2Q9H7B2 306 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 MBNL1Q9NR56 388 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 SPATA6Q9NWH7 488 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 GPR34Q9UPC5 381 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 TRBV5-3A0A0A0MS03 114 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 C17orf113A0A1B0GUU1 675 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 H0YIV9 168 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 VEGFDO43915 354 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 KCNH1O95259 989 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 LYNP07948 512 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 HOXB9P17482 250 aaPredicted RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 PTPN6P29350 595 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 FGL2Q14314 439 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 RAB30Q15771 203 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 MAPKAPK3Q16644 382 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 GTDC1Q4AE62 458 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 GRHL2Q6ISB3 625 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 KIAA1211LQ6NV74 962 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 PRR23BQ6ZRT6 265 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 HEATR4Q86WZ0 1026 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 GALNT4Q8N4A0 578 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 APOLD1Q96LR9 279 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 TSSK3Q96PN8 268 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 OR52E6Q96RD3 313 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ZBTB18Q99592 522 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 NRTNQ99748 197 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 SLC29A1Q99808 456 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ZDHHC5Q9C0B5 715 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 COQ10BQ9H8M1 238 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 TM7SF3Q9NS93 570 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 CKAP5Q14008 2032 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ATG2BQ96BY7 2078 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 C15orf38-AP3S2A0A0A6YYH1 394 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 DHRS12A0PJE2 317 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 C7orf72A4D263 438 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 DPPA5A6NC42 116 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 C1QCP02747 245 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 APODP05090 189 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 MRPS35P82673 323 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 CATSPEREQ5SY80 951 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 FAM46CQ5VWP2 391 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 NOXRED1Q6NXP6 359 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ARPINQ7Z6K5 226 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 C10orf111Q8N326 155 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 OR8J3Q8NGG0 315 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ITFG2Q969R8 447 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 FOPNLQ96NB1 174 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 INPP5KQ9BT40 448 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 TRMT61BQ9BVS5 477 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 PAIP1Q9H074 479 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 OR52A5Q9H2C5 316 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 UBAP1Q9NZ09 502 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
USP47-201ENST00000305481 AURKCQ9UQB9 309 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms