RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 A0A1W2PPV9 198 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 NDC80O14777 642 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 CTSBP07858 339 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 CMPK1P30085 196 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 FASTKQ14296 549 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 HIF1AQ16665 826 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 C1orf189Q5VU69 101 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 LRRC8EQ6NSJ5 796 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 ATG14Q6ZNE5 492 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 CNTN4Q8IWV2 1026 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 ASB11Q8WXH4 323 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 CERS2Q96G23 380 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 TRIM51Q9BSJ1 452 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 DHCR7Q9UBM7 475 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 ZC3H7BQ9UGR2 993 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 TRMT6Q9UJA5 497 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 BAHCC1Q9P281 2608 aa25.38■■□□□ 1.65
CDKN2A-201ENST00000304494 SUV39H1O43463 412 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ZBTB14O43829 449 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 SEC31AO94979 1220 aaKnown RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 RPA3P35244 121 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 SKIV2L2P42285 1042 aaKnown RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ITGA8P53708 1063 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ARL4CP56559 192 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 NFKB2Q00653 900 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 LACTB2Q53H82 288 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 YOD1Q5VVQ6 348 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 IGDCC3Q8IVU1 814 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ADAMTS17Q8TE56 1095 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 PKP4Q99569 1192 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 SELENOSQ9BQE4 189 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 PPANQ9NQ55 473 aaKnown RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ZNF71Q9NQZ8 489 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 ENAMQ9NRM1 1142 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 TAS2R13Q9NYV9 303 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 IFT80Q9P2H3 777 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 NDOR1Q9UHB4 597 aa25.37■■□□□ 1.65
CDKN2A-201ENST00000304494 GCN1Q92616 2671 aaKnown RBP25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 GFYI3L273 518 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 SRPX2O60687 465 aaPredicted RBP25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 ELK3P41970 407 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 PNLIPRP1P54315 467 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 GRM7Q14831 915 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 MLIPQ5VWP3 458 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 GALNT7Q86SF2 657 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 CPNE9Q8IYJ1 553 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 KRT12Q99456 494 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 CHMP2BQ9UQN3 213 aa25.36■■□□□ 1.65
CDKN2A-201ENST00000304494 EFCAB8A8MWE9 144 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 FANCGO15287 622 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 SYF2O95926 243 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 ALAS2P22557 587 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 CARSP49589 748 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 RGS4P49798 205 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 NKAIN1Q4KMZ8 207 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 CYHR1Q6ZMK1 362 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 PTRH1Q86Y79 214 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 RAB43Q86YS6 212 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 TTC29Q8NA56 475 aaPredicted RBP25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 CFAP36Q96G28 342 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 ZNF285Q96NJ3 590 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 NDNQ99608 321 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 ACAT2Q9BWD1 397 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 TRIM31Q9BZY9 425 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 ACSS2Q9NR19 701 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 ANKMY1Q9P2S6 941 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 TLK1Q9UKI8 766 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 TEX264Q9Y6I9 313 aa25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.35■■□□□ 1.65
CDKN2A-201ENST00000304494 SPTBP11277 2137 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 A0A1B0GX78 115 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 CTSVO60911 334 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 CCNDBP1O95273 360 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 SLC16A8O95907 504 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 AHSGP02765 367 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 MCM3P25205 808 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 GCGRP47871 477 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 TSTA3Q13630 321 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 HP1BP3Q5SSJ5 553 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 TCTN3Q6NUS6 607 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 SUSD1Q6UWL2 747 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 TTLL10Q6ZVT0 673 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 UBE2R2Q712K3 238 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 BBOF1Q8ND07 529 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 PWWP2AQ96N64 755 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 DPH7Q9BTV6 452 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 ING2Q9H160 280 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 MRPS30Q9NP92 439 aaKnown RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 UTP6Q9NYH9 597 aaKnown RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 ANAPC2Q9UJX6 822 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 TP53TG5Q9Y2B4 290 aa25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 SNRNP200O75643 2136 aaKnown RBP25.34■■□□□ 1.65
CDKN2A-201ENST00000304494 OR2A25A4D2G3 310 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 FITM1A5D6W6 292 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 ARGFXA6NJG6 315 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 KLF7O75840 302 aaPredicted RBP25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 PIM1P11309 404 aaPredicted RBP25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 GABRB3P28472 473 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 FRG1Q14331 258 aaKnown RBP25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 FAM214AQ32MH5 1076 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms