RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 MFSD13AQ14CX5 517 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC44A1Q8WWI5 657 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 AURKBQ96GD4 344 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 AAASQ9NRG9 546 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CHST7Q9NS84 486 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 DNAJB4Q9UDY4 337 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PXDNQ92626 1479 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 GNRHRP30968 328 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SREBF1P36956 1147 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 OR12D2P58182 307 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 FXYD6P3P58550 94 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ARHGAP11AQ6P4F7 1023 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ENAMQ9NRM1 1142 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 NCKAP5O14513 1909 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 RAB10P61026 200 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 DNAJC18Q9H819 358 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 OR2S2Q9NQN1 319 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 VNN3Q9NY84 501 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RUVBL1Q9Y265 456 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 GXYLT2A0PJZ3 443 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CERS1P27544 350 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 UGCGQ16739 394 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 EIPR1Q53HC9 387 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 FIGNQ5HY92 759 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PTGR2Q8N8N7 351 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 MYRFLQ96LU7 910 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ARFGEF2Q9Y6D5 1785 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 DFNA5O60443 496 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CSTF2P33240 577 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 VSTM1Q6UX27 236 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CREB3L2Q70SY1 520 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 SSX7Q7RTT5 188 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RDH11Q8TC12 318 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 LIN7CQ9NUP9 197 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RIMKLBQ9ULI2 386 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PRAMEF12O95522 483 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 VTNP04004 478 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CDK1P06493 297 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 GLP1RP43220 463 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PRKXP51817 358 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 IRF8Q02556 426 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PMPCAQ10713 525 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TANGO2Q6ICL3 276 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 DCUN1D3Q8IWE4 304 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TCTE3Q8IZS6 198 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 KCNN1Q92952 543 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 MFSD3Q96ES6 412 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PGAP3Q96FM1 320 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 SMCO4Q9NRQ5 59 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHGA2Q9Y5H1 932 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 AZIN1O14977 448 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 MAOAP21397 527 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CADM2Q8N3J6 435 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CHPT1Q8WUD6 406 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CHTF18Q8WVB6 975 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RIT1Q92963 219 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC38A4Q969I6 547 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 FAM122AQ96E09 287 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 DPCDQ9BVM2 203 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ARGFXA6NJG6 315 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 XPNPEP2O43895 674 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 EPHA3P29320 983 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ADIGQ0VDE8 80 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NTRK3Q16288 839 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ANGEL2Q5VTE6 544 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 GLYATQ6IB77 296 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TAS2R14Q9NYV8 317 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NRXN1Q9ULB1 1477 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 C2orf78A6NCI8 922 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 EQTNQ9NQ60 294 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 HACL1Q9UJ83 578 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 OXSR1O95747 527 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CALCAP01258 141 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 FGBP02675 491 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 VDRP11473 427 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CDH12P55289 794 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CASTOR1Q8WTX7 329 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 BEX2Q9BXY8 128 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 BEX1Q9HBH7 125 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 POLE4Q9NR33 117 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 MROH1Q8NDA8 1641 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 LRP5LA4QPB2 252 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF823P16415 610 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 MCOLN2Q8IZK6 566 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 CNTD1Q8N815 330 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ALPK1Q96QP1 1244 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TAAR1Q96RJ0 339 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 KCNJ16Q9NPI9 418 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NPIPA2E9PIF3 369 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NPIPA5E9PKD4 350 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NPIPA3F8WFD2 350 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 IGSF6O95976 241 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 GKN3PP0CG01 181 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PER3P56645 1201 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms