RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ACP5P13686 325 aa15.07■□□□□ 0
LSM6-201ENST00000296581 CAPN13Q6MZZ7 669 aaPredicted RBP15.07■□□□□ 0
LSM6-201ENST00000296581 GPR153Q6NV75 609 aa15.07■□□□□ 0
LSM6-201ENST00000296581 CHST15Q7LFX5 561 aaPredicted RBP15.07■□□□□ 0
LSM6-201ENST00000296581 DCUN1D3Q8IWE4 304 aa15.07■□□□□ 0
LSM6-201ENST00000296581 DSELQ8IZU8 1212 aa15.07■□□□□ 0
LSM6-201ENST00000296581 PPFIBP2Q8ND30 876 aa15.07■□□□□ 0
LSM6-201ENST00000296581 FLCNQ8NFG4 579 aa15.07■□□□□ 0
LSM6-201ENST00000296581 RAD51AP1Q96B01 352 aa15.07■□□□□ 0
LSM6-201ENST00000296581 MYOCQ99972 504 aa15.07■□□□□ 0
LSM6-201ENST00000296581 CA14Q9ULX7 337 aa15.07■□□□□ 0
LSM6-201ENST00000296581 POM121BA6NF01 834 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TMEM221A6NGB7 291 aa15.06■□□□□ 0
LSM6-201ENST00000296581 FBP2O00757 339 aa15.06■□□□□ 0
LSM6-201ENST00000296581 FPGTO14772 594 aa15.06■□□□□ 0
LSM6-201ENST00000296581 HNRNPA2B1P22626 353 aaKnown RBP15.06■□□□□ 0
LSM6-201ENST00000296581 KELP23276 732 aa15.06■□□□□ 0
LSM6-201ENST00000296581 HALP42357 657 aa15.06■□□□□ 0
LSM6-201ENST00000296581 CASP2P42575 452 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TBPL1P62380 186 aa15.06■□□□□ 0
LSM6-201ENST00000296581 IRF8Q02556 426 aa15.06■□□□□ 0
LSM6-201ENST00000296581 LRRC32Q14392 662 aa15.06■□□□□ 0
LSM6-201ENST00000296581 RPS6KA2Q15349 733 aa15.06■□□□□ 0
LSM6-201ENST00000296581 AP5B1Q2VPB7 878 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TMEM31Q5JXX7 168 aa15.06■□□□□ 0
LSM6-201ENST00000296581 GALNT13Q8IUC8 556 aa15.06■□□□□ 0
LSM6-201ENST00000296581 RGL4Q8IZJ4 473 aa15.06■□□□□ 0
LSM6-201ENST00000296581 OR5AR1Q8NGP9 310 aa15.06■□□□□ 0
LSM6-201ENST00000296581 NCSTNQ92542 709 aa15.06■□□□□ 0
LSM6-201ENST00000296581 CLPTM1LQ96KA5 538 aa15.06■□□□□ 0
LSM6-201ENST00000296581 NPAS2Q99743 824 aa15.06■□□□□ 0
LSM6-201ENST00000296581 C1orf50Q9BV19 199 aa15.06■□□□□ 0
LSM6-201ENST00000296581 MRPL1Q9BYD6 325 aaKnown RBP15.06■□□□□ 0
LSM6-201ENST00000296581 LMAN1LQ9HAT1 526 aa15.06■□□□□ 0
LSM6-201ENST00000296581 ZIM2Q9NZV7 527 aa15.06■□□□□ 0
LSM6-201ENST00000296581 PSMD13Q9UNM6 376 aa15.06■□□□□ 0
LSM6-201ENST00000296581 KANSL1LA0AUZ9 987 aa15.06■□□□□ 0
LSM6-201ENST00000296581 E7ENX8 843 aa15.06■□□□□ 0
LSM6-201ENST00000296581 E7EQ34 232 aa15.06■□□□□ 0
LSM6-201ENST00000296581 NPIPB8E9PQR5 432 aa15.06■□□□□ 0
LSM6-201ENST00000296581 IFRD1O00458 451 aaPredicted RBP15.06■□□□□ 0
LSM6-201ENST00000296581 SEMA4FO95754 770 aa15.06■□□□□ 0
LSM6-201ENST00000296581 PDYNP01213 254 aa15.06■□□□□ 0
LSM6-201ENST00000296581 RPN2P04844 631 aa15.06■□□□□ 0
LSM6-201ENST00000296581 SLC35G4P0C7Q5 338 aa15.06■□□□□ 0
LSM6-201ENST00000296581 CD22P20273 847 aa15.06■□□□□ 0
LSM6-201ENST00000296581 CLDN2P57739 230 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TAP2Q03519 686 aa15.06■□□□□ 0
LSM6-201ENST00000296581 ZNF33BQ06732 778 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TBL3Q12788 808 aaKnown RBP15.06■□□□□ 0
LSM6-201ENST00000296581 SGO1Q5FBB7 561 aa15.06■□□□□ 0
LSM6-201ENST00000296581 REP15Q6BDI9 236 aa15.06■□□□□ 0
LSM6-201ENST00000296581 SYTL1Q8IYJ3 562 aa15.06■□□□□ 0
LSM6-201ENST00000296581 PGAM4Q8N0Y7 254 aa15.06■□□□□ 0
LSM6-201ENST00000296581 OR5K2Q8NHB8 316 aa15.06■□□□□ 0
LSM6-201ENST00000296581 TSPEARQ8WU66 669 aa15.06■□□□□ 0
LSM6-201ENST00000296581 SELENOMQ8WWX9 145 aa15.06■□□□□ 0
LSM6-201ENST00000296581 SLC35B4Q969S0 331 aa15.06■□□□□ 0
LSM6-201ENST00000296581 BMFQ96LC9 184 aa15.06■□□□□ 0
LSM6-201ENST00000296581 ELOVL6Q9H5J4 265 aa15.06■□□□□ 0
LSM6-201ENST00000296581 FGF22Q9HCT0 170 aa15.06■□□□□ 0
LSM6-201ENST00000296581 RHBDL2Q9NX52 303 aa15.06■□□□□ 0
LSM6-201ENST00000296581 SLC7A8Q9UHI5 535 aa15.06■□□□□ 0
LSM6-201ENST00000296581 PRPF19Q9UMS4 504 aaKnown RBP15.06■□□□□ 0
LSM6-201ENST00000296581 BBIP1A8MTZ0 92 aa15.05■□□□□ 0
LSM6-201ENST00000296581 NRP2O60462 931 aa15.05■□□□□ 0
LSM6-201ENST00000296581 ERGP11308 486 aa15.05■□□□□ 0
LSM6-201ENST00000296581 PRPH2P23942 346 aa15.05■□□□□ 0
LSM6-201ENST00000296581 HNF4AP41235 474 aa15.05■□□□□ 0
LSM6-201ENST00000296581 GNPDA1P46926 289 aa15.05■□□□□ 0
LSM6-201ENST00000296581 PNLIPRP1P54315 467 aa15.05■□□□□ 0
LSM6-201ENST00000296581 NME5P56597 212 aa15.05■□□□□ 0
LSM6-201ENST00000296581 HMGCS1Q01581 520 aa15.05■□□□□ 0
LSM6-201ENST00000296581 TFF2Q03403 129 aa15.05■□□□□ 0
LSM6-201ENST00000296581 FZD5Q13467 585 aa15.05■□□□□ 0
LSM6-201ENST00000296581 ART3Q13508 389 aa15.05■□□□□ 0
LSM6-201ENST00000296581 LRP8Q14114 963 aa15.05■□□□□ 0
LSM6-201ENST00000296581 DOC2AQ14183 400 aa15.05■□□□□ 0
LSM6-201ENST00000296581 NFATC4Q14934 902 aa15.05■□□□□ 0
LSM6-201ENST00000296581 RFTN2Q52LD8 501 aaPredicted RBP15.05■□□□□ 0
LSM6-201ENST00000296581 XKR6Q5GH73 641 aa15.05■□□□□ 0
LSM6-201ENST00000296581 FRG2Q64ET8 278 aa15.05■□□□□ 0
LSM6-201ENST00000296581 GRHL2Q6ISB3 625 aa15.05■□□□□ 0
LSM6-201ENST00000296581 BLOC1S3Q6QNY0 202 aa15.05■□□□□ 0
LSM6-201ENST00000296581 C17orf50Q8WW18 174 aa15.05■□□□□ 0
LSM6-201ENST00000296581 LZICQ8WZA0 190 aa15.05■□□□□ 0
LSM6-201ENST00000296581 FRG2BQ96QU4 278 aa15.05■□□□□ 0
LSM6-201ENST00000296581 ACPTQ9BZG2 426 aa15.05■□□□□ 0
LSM6-201ENST00000296581 SLC52A3Q9NQ40 469 aa15.05■□□□□ 0
LSM6-201ENST00000296581 MRPL40Q9NQ50 206 aaKnown RBP15.05■□□□□ 0
LSM6-201ENST00000296581 ASIC5Q9NY37 505 aa15.05■□□□□ 0
LSM6-201ENST00000296581 MRPS17Q9Y2R5 130 aaKnown RBP15.05■□□□□ 0
LSM6-201ENST00000296581 KCNE2Q9Y6J6 123 aa15.05■□□□□ 0
LSM6-201ENST00000296581 NPPBP16860 134 aa15.05■□□□□ -0
LSM6-201ENST00000296581 ZFP36L2P47974 494 aaKnown RBP15.05■□□□□ -0
LSM6-201ENST00000296581 CLCNKAP51800 687 aa15.05■□□□□ -0
LSM6-201ENST00000296581 MAD2L1Q13257 205 aaPredicted RBP15.05■□□□□ -0
LSM6-201ENST00000296581 HACD2Q6Y1H2 254 aa15.05■□□□□ -0
LSM6-201ENST00000296581 NET1Q7Z628 596 aaPredicted RBP15.05■□□□□ -0
LSM6-201ENST00000296581 ZFAND4Q86XD8 727 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms