RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 CLK4Q9HAZ1 481 aaKnown RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 DNAJC11Q9NVH1 559 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 VNN3Q9NY84 501 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 ELOVL7A1L3X0 281 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 SERPINA1P01009 418 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 IL6P05231 212 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 AMD1P17707 334 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 S100A3P33764 101 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 BMPR1AP36894 532 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 PIGAP37287 484 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 GJA8P48165 433 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 EPHA5P54756 1037 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 IRF8Q02556 426 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 PIGFQ07326 219 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 PRSS36Q5K4E3 855 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 IER5LQ5T953 404 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FAM109BQ6ICB4 259 aaPredicted RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 NOXRED1Q6NXP6 359 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FAM180BQ6P0A1 224 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 DOK6Q6PKX4 331 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 TMEM220Q6QAJ8 160 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 TMC5Q6UXY8 1006 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 THOC6Q86W42 341 aaKnown RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 MCOLN3Q8TDD5 553 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 AP2M1Q96CW1 435 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 REXO4Q9GZR2 422 aaKnown RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 CDC14AQ9UNH5 594 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 INSL6Q9Y581 213 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 COMMD3-BMI1R4GMX3 469 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 MAGEB17A8MXT2 336 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 SAP18O00422 153 aaKnown RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 PRSS23O95084 383 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CST1P01037 141 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 NPPAP01160 153 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 C8GP07360 202 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ELFN1P0C7U0 828 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 XPAP23025 273 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 GZMMP51124 257 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ARSFP54793 590 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CLDN8P56748 225 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 POLR2LP62875 67 aaKnown RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 IRX1P78414 480 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 CREMQ03060 361 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CHRNB3Q05901 458 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 TMEM115Q12893 351 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 SPIDRQ14159 915 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 UGT8Q16880 541 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CES5AQ6NT32 575 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 BRAT1Q6PJG6 821 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 LRRC70Q7Z2Q7 622 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 TECPR1Q7Z6L1 1165 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ADGRD2Q7Z7M1 963 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ZBTB46Q86UZ6 589 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 SLC29A3Q9BZD2 475 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 NAA50Q9GZZ1 169 aaKnown RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 EPB41L1Q9H4G0 881 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 EBF1Q9UH73 591 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 TULP3O75386 442 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CREG1O75629 220 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CPSF4O95639 269 aaKnown RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 SOD1P00441 154 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 NUDT7P0C024 238 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CISD3P0C7P0 127 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 RAP2AP10114 183 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 UMPSP11172 480 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 IL7RP16871 459 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 PFKLP17858 780 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CAPGP40121 348 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ALDH3B2P48448 385 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 CATSPEREQ5SY80 951 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 AGTRAPQ6RW13 159 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 MICU2Q8IYU8 434 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 L3MBTL4Q8NA19 623 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 BTN2A2Q8WVV5 523 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 FAM120BQ96EK7 910 aaKnown RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 HIC2Q96JB3 615 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 PKP4Q99569 1192 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 MYOCQ99972 504 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 STOX2Q9P2F5 926 aaPredicted RBP11.42□□□□□ -0.58
RHO-201ENST00000296271 ZNF639Q9UID6 485 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 FBXO10Q9UK96 956 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 SNX6Q9UNH7 406 aa11.42□□□□□ -0.58
RHO-201ENST00000296271 PLXNA2O75051 1894 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 NPC1O15118 1278 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SLCO2B1O94956 709 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ALPLP05186 524 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 LAMP1P11279 417 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 HOXB9P17482 250 aaPredicted RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 CYP2A7P20853 494 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 IMPA1P29218 277 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MMP12P39900 470 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 DGKGP49619 791 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 PTPN5P54829 565 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ADARB1P78563 741 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms