RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 GOT2P00505 430 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 ANXA4P09525 319 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 T-ENOLP0DO92 83 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 IFI30P13284 250 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 DUSP4Q13115 394 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CXorf57Q6NSI4 855 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CRYBG2Q8N1P7 616 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 DNAJA4Q8WW22 397 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 IFT27Q9BW83 186 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 FARSBQ9NSD9 589 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 EBF1Q9UH73 591 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 EXOSC1Q9Y3B2 195 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 ARPC4-TTLL3A0A0A6YYG9 625 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 TCAF2A6NFQ2 919 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 M0R233 179 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 OR4Q2P0C623 313 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 RFC2P35250 354 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 RPL4P36578 427 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 AP1S2P56377 157 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 PAFAH1B3Q15102 231 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 TRAM1Q15629 374 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 TSTQ16762 297 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 NCBP2-AS2Q69YL0 99 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 OR4K2Q8NGD2 314 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CEP76Q8TAP6 659 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CXorf40BQ96DE9 158 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CREG1O75629 220 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ITGB1P05556 798 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ANXA3P12429 323 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 MATN1P21941 496 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 NRLP54845 237 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 TAS2R43P59537 309 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 PFKPQ01813 784 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 DSC2Q02487 901 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 MMAAQ8IVH4 418 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 LGI4Q8N135 537 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 MUS81Q96NY9 551 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CEPT1Q9Y6K0 416 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CNTN5O94779 1100 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CSTF1Q05048 431 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 FADDQ13158 208 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 IDNKQ5T6J7 187 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 STEAP4Q687X5 459 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CCBE1Q6UXH8 406 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 JPH3Q8WXH2 748 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 AARSD1Q9BTE6 412 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 POLR2J3Q9H1A7 115 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 APODP05090 189 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CTPS1P17812 591 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CD247P20963 164 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 CFAP52Q8N1V2 620 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 GPR156Q8NFN8 814 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 SMG7Q92540 1137 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 THRSPQ92748 146 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 LGALS12Q96DT0 336 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 TBATAQ96M53 351 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ZNF599Q96NL3 588 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 MAGEH1Q9H213 219 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 GPN3Q9UHW5 284 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 INMT-MINDY4F8WBC2 141 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 PRKYO43930 277 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 OR7A10O76100 309 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 SLC25A14O95258 325 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 IL7RP16871 459 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 GALNT1Q10472 559 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ANKMY1Q9P2S6 941 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 TBC1D24Q9ULP9 559 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 PCDHGA11Q9Y5H2 935 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 ZNF780BQ9Y6R6 833 aa17.11■□□□□ 0.33
PCDHA13-201ENST00000289272 SH3BGRLO75368 114 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 TRIM3O75382 744 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 OR2B3O76000 313 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 EPCAMP16422 314 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 RORAP35398 523 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 SPAM1P38567 509 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 IFNL1Q8IU54 200 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 FAM98AQ8NCA5 519 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 FAM83DQ9H4H8 585 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 SMURF1Q9HCE7 757 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 CFAP97Q9P2B7 532 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 SLC27A6Q9Y2P4 619 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 SNX10Q9Y5X0 201 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 GRXCR2A6NFK2 248 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 ARL5CA6NH57 179 aa17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 CACNB4O00305 520 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-201ENST00000289272 DCLK1O15075 740 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms