RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ZNF28P17035 718 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 HIST1H2ADP20671 130 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 CRABP2P29373 138 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 EIF2S3P41091 472 aaKnown RBP19.13■□□□□ 0.65
TIMP4-201ENST00000287814 GRIA3P42263 894 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 GABRA4P48169 554 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 ACY1Q03154 408 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 CSHL1Q14406 222 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 IL11RAQ14626 422 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 WDR93Q6P2C0 686 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 AGTRAPQ6RW13 159 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 CEACAM20Q6UY09 585 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 PTERQ96BW5 349 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 TCTN2Q96GX1 697 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 HIST1H2AHQ96KK5 128 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 HIST1H2AJQ99878 128 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 H2AFJQ9BTM1 129 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 ABCF3Q9NUQ8 709 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 ARL15Q9NXU5 204 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 CTNNAL1Q9UBT7 734 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 NOVA2Q9UNW9 492 aaKnown RBP19.13■□□□□ 0.65
TIMP4-201ENST00000287814 PCDHB11Q9Y5F2 797 aa19.13■□□□□ 0.65
TIMP4-201ENST00000287814 C2P06681 752 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 CTSBP07858 339 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 KCNC1P48547 511 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 PCBP4P57723 403 aaKnown RBP19.12■□□□□ 0.65
TIMP4-201ENST00000287814 IRF9Q00978 393 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 TGIF1Q15583 401 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 TMTC4Q5T4D3 741 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 FIGLAQ6QHK4 219 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 DNAJC22Q8N4W6 341 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 PARD6BQ9BYG5 372 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 IGSF5Q9NSI5 407 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 TAC3Q9UHF0 121 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 ZNF180Q9UJW8 692 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 URB1O60287 2271 aaKnown RBP19.12■□□□□ 0.65
TIMP4-201ENST00000287814 AHCTF1Q8WYP5 2266 aa19.12■□□□□ 0.65
TIMP4-201ENST00000287814 IGKV1-8A0A0C4DH67 115 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ZNF839A8K0R7 811 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 SHBGP04278 402 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ENO2P09104 434 aaPredicted RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 RPA3P35244 121 aaPredicted RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 AP1S2P56377 157 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 NAE1Q13564 534 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 OR4D1Q15615 310 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 DEFB110Q30KQ9 67 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 PRAMEF17Q5VTA0 474 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 PWWP2BQ6NUJ5 590 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 PPP1R3BQ86XI6 285 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 NXNL1Q96CM4 212 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 TEFMQ96QE5 360 aaKnown RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 TRIM54Q9BYV2 358 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 CHRNA10Q9GZZ6 450 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 SLC6A20Q9NP91 592 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 RARRES3Q9UL19 164 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 OARD1Q9Y530 152 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 IKBKGQ9Y6K9 419 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ANKRD12Q6UB98 2062 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 CFAP47Q6ZTR5 3102 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 MSL3P1P0C860 447 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 SERPINB9P50453 376 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 TBPL1P62380 186 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 PRDX1Q06830 199 aaKnown RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ST3GAL2Q16842 350 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 TIPARPQ7Z3E1 657 aaKnown RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 DTX1Q86Y01 620 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 CENPLQ8N0S6 344 aaPredicted RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ZNF248Q8NDW4 579 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 OR1L3Q8NH93 324 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 AENQ8WTP8 325 aaKnown RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 KCTD4Q8WVF5 259 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 UBLCP1Q8WVY7 318 aaPredicted RBP19.11■□□□□ 0.65
TIMP4-201ENST00000287814 PYCR2Q96C36 320 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 FBXL8Q96CD0 374 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 DCBLD2Q96PD2 775 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ZPBPQ9BS86 351 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 ACOT9Q9Y305 439 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 KLK4Q9Y5K2 254 aa19.11■□□□□ 0.65
TIMP4-201ENST00000287814 SDK2Q58EX2 2172 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 A0A096LPK6 155 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 TEX51A0A1B0GUA7 166 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 SRRM3A6NNA2 597 aaPredicted RBP19.1■□□□□ 0.65
TIMP4-201ENST00000287814 TMEM150CB9EJG8 249 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 TYK2P29597 1187 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 MAGEA12P43365 314 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ATP6V0D1P61421 351 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 CLN3Q13286 438 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ICE2Q659A1 982 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ADGRD1Q6QNK2 874 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ADAMTSL2Q86TH1 951 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ISCA2Q86U28 154 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ISL2Q96A47 359 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 KIAA1191Q96A73 305 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 ZUFSPQ96AP4 578 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 MED8Q96G25 268 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 DPH7Q9BTV6 452 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 INTS7Q9NVH2 962 aaKnown RBP19.1■□□□□ 0.65
TIMP4-201ENST00000287814 PILRAQ9UKJ1 303 aa19.1■□□□□ 0.65
TIMP4-201ENST00000287814 SH2B3Q9UQQ2 575 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms